Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2230 93.3 4e-14 seq2330 84.2 2e-11 >seq2230 Length=15872 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 133471 CTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 |||| || || |||||||| | | ||| || || ||||| | || || || ||| | Sbjct 220 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCG--TCCTCCAATTGTTTTCCTGCGAA 163 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| | ||||| ||||||||||| || ||||||||||| ||||| ||| | | Sbjct 162 AATCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATT 103 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | |||||||| | || || || | |||| ||||| ||||| || || || || Sbjct 102 ATCGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGAC 43 Query 133649 GAAAATCTGCAT 133660 |||||||||||| Sbjct 42 GAAAATCTGCAT 31 >seq2330 Length=206 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || |||||||| || |||||||| | | || ||| ||| || || || || | Sbjct 10 GTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGT--ACGTCCGTCTTCTAGTTGTTTAC 67 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || || ||||| || ||||| || ||||| ||||| ||||| || Sbjct 68 CAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCT 127 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||||| | ||| || || | |||| ||| || || || || | Sbjct 128 TTACATTATCGATCGTGTCGGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCG 187 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| || ||||||||||| Sbjct 188 TTTTCACAAAAATCTGCAT 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483376935605160