Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3420 123 6e-23 seq2330 104 5e-17 seq2230 102 2e-16 >seq3420 Length=11708 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| ||||| ||||| || ||||||||||| || | || | || ||| Sbjct 280 AGCACCAGATGAAGCGTAGATTCTTTCTGAATGTTGTAATCCGCAAGCGTGCGACCGTCT 221 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || |||||||| || | ||||| || | | ||||||||||| ||| Sbjct 220 TCCAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCCTTGTCT 161 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || || ||| | || | |||||||| ||| ||||| | ||||||||| Sbjct 160 TGAATCTTGGCCTTTACATTATCGATCGTGTCTGAAGACTCAACTTCCAACGTAATAGTT 101 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || ||||| || || | |||||| Sbjct 100 TTCCCAGTTAGCGTCTTAACAAAAATTTGCATT 68 >seq2330 Length=206 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCG 151967 || || ||||| |||||||||||||| || | ||| | || |||||||| ||| || Sbjct 10 GTTGATTCTTTCTGGATGTTGTAATCCGCAAGAGTACGTCCGTCTTCTAGTTGTTTACCA 69 Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 |||||||| || | ||||| || | | |||||||| || |||||||| || || Sbjct 70 GCGAAGATCAGACGTTGCTGATCAGGAGGAATTCCTTCTTTGTCTTGAATCTTGGCCTTT 129 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 ||| | || | |||| ||| ||| ||||| | ||| || || || || || || || Sbjct 130 ACATTATCGATCGTGTCGGAAGACTCAACTTCCAAAGTGATGGTCTTTCCAGTAAGCGTT 189 Query 152088 TTCACGAAGACCTGCAT 152104 ||||| || | |||||| Sbjct 190 TTCACAAAAATCTGCAT 206 >seq2230 Length=15872 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 ||||||||||||||||||| || | |||| || || || | ||| || ||||| | Sbjct 220 CTTTTTGGATGTTGTAATCCGCGAGCGTTCGGCCGTCCTCCAATTGTTTTCCTGCGAAAA 161 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | | | ||| ||||| | | ||||||||||| |||||||| || || ||| | | Sbjct 160 TCAAACGCTGTTGGTCGGGAGGAATTCCTTCCTTGTCTTGAATCTTCGCCTTCACATTAT 101 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | |||| || || || |||||||| || ||||| || ||||| ||||| |||| Sbjct 100 CGATCGTGTCGGATGATTCGACCTCAAGAGTGATTGTTTTCCCGGTGAGTGTCTTGACGA 41 Query 152095 AGACCTGCATT 152105 | | ||||||| Sbjct 40 AAATCTGCATT 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153713487814789