Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq474 109 7e-19 >seq474 Length=30871 Score = 109 bits (120), Expect = 7e-19 Identities = 267/402 (66%), Gaps = 2/402 (0%) Strand=Plus/Minus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||||||||| | ||||| ||||||||| | ||||| || || |||||| | Sbjct 11202 AAGGCGATTTAGGACCAATCTACGGCTTTCAATGGCGTCATTTCGGTGCAAGTTACACAG 11143 Query 50533 AT-TGCGACGTAAATTACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGACG 50591 || ||| | | ||||| || || ||| | |||||||| | | ||| | Sbjct 11142 ATATGC-ATGCGGATTACAGTGGCCAGGGCTTTGATCAACTCGCCGATGTGATACACAAA 11084 Query 50592 TTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATATA 50651 | ||||| ||| | ||| ||||| | | |||| ||||||||||||||| || Sbjct 11083 CTCAAAACTGACCAAAATTGTCGACGTATCATCTTATCCGCTTGGAATCCAACCGATTTA 11024 Query 50652 GATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGCCACAGACAATGTT 50711 | ||| | |||||||| |||||| | | || |||||||| | || | | Sbjct 11023 GCCGAAATGGCATTACCTCCCTGTCATCTGATGTGCCAATTTTACGTTGCAAATGGGGAA 10964 Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 ||||| || ||| || || |||| |||||||| ||| | |||||||| || || | Sbjct 10963 TTATCATGCCAAATGTACCAGCGATCCGCTGATATTGGTCTGGGCGTTCCATTTAATATT 10904 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831 ||| ||||| | || || | |||| || || | ||| | |||| || || Sbjct 10903 GCTAGCTACGCGCTTTTGACAAAAATGATTGCACACGTGACTGATCTCCAACCCGGCGAG 10844 Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTACCTCGATCAC 50873 ||| ||||| | | ||||| || ||||| ||| | ||||| Sbjct 10843 TTTGTTCATGTGATCGGAGATGCCCATATCTACATGAATCAC 10802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667014671264040