Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Albugo_20candida_20[genbank_20GCA_5F001306775.1_202015-10-05] 7,259 sequences; 32,214,895 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2330 163 7e-35 seq3284 105 2e-17 >seq2330 Length=206 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| |||||||| || || ||||| || ||||| | || || || || ||| Sbjct 203 CAGATTTTTGTGAAAACGCTTACTGGAAAGACCATCACTTTGGAAGTTGAGTCTTCCGAC 144 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||| |||||||||||||| ||||| || |||||| Sbjct 143 ACGATCGATAATGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCTGATCAGCAA 84 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || ||||| || ||||| ||| | |||||||| ||||| ||| || Sbjct 83 CGTCTGATCTTCGCTGGTAAACAACTAGAAGACGGACGTACTCTTGCGGATTACAACATC 24 Query 178104 CAAAAAGAATCAACACTGCA 178123 || ||||||||||| |||| Sbjct 23 CAGAAAGAATCAACGTTGCA 4 >seq3284 Length=77587 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 177947 AGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAA 178006 ||||||||| || || ||||| || ||| | ||||| || || || ||||| || Sbjct 66776 AGGAAAAACAATTACACTCGAAGTAGAATCAGCGGACACGATTGACAATGTCAAGAGCAA 66835 Query 178007 GATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACA 178066 |||||| ||||| |||||||| ||||| ||||| ||||| || || || ||||||||||| Sbjct 66836 GATTCAAGACAAGGAAGGAATTCCTCCTGACCAACAACGTCTAATTTTTGCCGGAAAACA 66895 Query 178067 GCTCGAAGATGGAAGGACTCT 178087 || ||||| || | ||||| Sbjct 66896 ACTTGAAGACGGTCGTACTCT 66916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203619245851246