Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2 288 9e-73 seq18 206 2e-48 seq41 131 1e-25 seq34 131 1e-25 seq7 129 5e-25 seq14 114 1e-20 >seq2 Length=2059303 Score = 288 bits (318), Expect = 9e-73 Identities = 654/982 (67%), Gaps = 16/982 (2%) Strand=Plus/Plus Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 || ||||| | | ||||||||| ||| |||||||| || ||||| |||| ||||| Sbjct 916906 AATTCGCCCGCGAGGACGCGGCGGCTGTACATGTTGGACGTAAACGGCTCGATTGATTCG 916965 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||||| || || ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 916966 TTGTTGCCGAGGATCTGCGCGGTGGACGCCGTGGGCATGGGGGCCAAGAGCAGCGAGTTG 917025 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGC 22645 | | |||||||| | | || ||||||| || ||||||||||||||| |||||| Sbjct 917026 CGGATGCCGTGCTGGGCCACTTGCGCCTTGAGCGACGCCCAGTCCCACAGATCCGACGGC 917085 Query 22646 GTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTAC 22705 || || | |||||| ||||| || ||| ||| ||||| | ||| ||| ||||| Sbjct 917086 GTGAC---GCCCCACAAGTCGTACTGGAACTTGCCCTGACTCACGGGGGAGCCCTCGTAG 917142 Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATAT 22765 || |||||||| || | || ||| ||||| | || |||| ||| ||| || Sbjct 917143 GTCTCGTACGGCCCTTGGCTCTTGGCGAGTTCCATGGACGTTTCCATGGCGGCGTGGTAG 917202 Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825 || || || ||||| | || ||||| | ||| | || ||| ||| | | Sbjct 917203 ATGGTTTCAAAGATCTGCTGGTTCAGCACCTTGGCTTCCACCGACTCGAACGAGTACCCC 917262 Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885 || | | ||||||||| || | || || ||||| || |||||||| |||| || Sbjct 917263 ATGAGGATGAACGCGTCGGCAAGGCCTTGGACGCCAATCCCGATCGGGCGGTGGCGCATG 917322 Query 22886 TTCGACACTTTTGCC----TCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 || || |||| || | | || || | || ||||| |||| | Sbjct 917323 TTG----CTGTTGCGCGCTTCTTGGATGGGGTAATAGTTGACGTCGATCACCTTGTTGAG 917378 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001 ||| | || || | || | || ||||||| |||| | || Sbjct 917379 GTTGGTCGTGACCACCTTGGCGATCTTGTGCAGGTGTGCAAAGTC--AAACACAGCGTTC 917436 Query 23002 TACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGA 23061 | | ||||||||| | ||||| || || | ||||| |||||||| ||||| ||| Sbjct 917437 T-CGACAAACTTGGACAGCGCGATGGACGCCAAGTTGCACACGGCCACTTCGTCCTTGCT 917495 Query 23062 CGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTG 23121 ||||||||| | || ||| || | ||| |||| |||||||||| || ||| Sbjct 917496 CGTGTACTCGATGATCTCGCAGCACAAGTTGGACGACTTGATCGTGCCCAGGTTCTGCTG 917555 Query 23122 GTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTG 23181 |||| || | ||||||| ||||||||| ||||||||||||||||| || ||||| || Sbjct 917556 GTTGGACTTGCCGTTGCACGCATCCTTGTACAGCATGTACGGCGTGCCGGTTTCGACTTG 917615 Query 23182 CGACTCGATGATCGCTCGCCACATAGTCTGAG-CGTGAACACGTCGCACGTACCTGCCTT 23240 |||||| | ||| || ||||| ||| | | ||| | | || || | | ||||| Sbjct 917616 CGACTCCAAGATGGCGAACCACAACTGCTGCGCCTTGATCGTCTTGCGCGCA-CGGCCTT 917674 Query 23241 CTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGG 23300 | ||||||||| ||| ||| ||| || || ||||| || | || ||| ||| || | Sbjct 917675 CCGACTCGTACTTGTGGAACAGCGCCTCGAACTCGGCGCCCCAGCATTCGTGCAGCCCCG 917734 Query 23301 GCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAA 23360 ||| || | ||||| | | ||||| || || ||||| |||| || | Sbjct 917735 GCGCTTCATTGGGACAGAACAAGCTCCAGTCGCCGTTCGACTCGACGCGCTTCATGAACA 917794 Query 23361 GATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGT 23420 ||||||| ||||| | |||||||||| |||||||| || | || |||||| || Sbjct 917795 GATCCGGAATCCACATGGCGTAGAACAAGTCGCGGGCACGATGCAGTTCATTGCCGTGGT 917854 Query 23421 TCTTTTTCAAATCCAAAAAGTC 23442 |||| || | |||||| || || Sbjct 917855 TCTTCTTGAGATCCAAGAATTC 917876 >seq18 Length=978767 Score = 206 bits (228), Expect = 2e-48 Identities = 487/723 (67%), Gaps = 32/723 (4%) Strand=Plus/Plus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| ||||||| || || || ||| || || || ||||| || ||| | | | Sbjct 580510 CACGTGCTGGCGTTCTTTGCTGCGAGCGACGGCATCGTCAACGAAAACCTGGCCATGA-A 580568 Query 57747 TTTTCACAA-GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 ||| ||| ||||||||||| | |||||| |||||||||| || || ||| | ||||| Sbjct 580569 CTTTAGCAATGAAGTGCAAGTCCCCGAGGCGCGATGCTTTTATGGGTTCCAAATCGCCAT 580628 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 |||||| | || || ||| |||| ||||| |||||||| || ||| | |||||| ||| Sbjct 580629 CGAAAACATCCACTCGGAAGTGTACTCGCTCCTCATCGACACATACATCAAGGACC-CGA 580687 Query 57866 C-GAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGG 57921 | ||||| | || | ||| |||||||| || || | || || | |||| Sbjct 580688 CCGAGAAGGACCGCGTGCTGCGCGCCATCGAAACCATTCC---GTGCGTCATGCGCAAGG 580744 Query 57922 CAGAGTGGTCAATCAAATGG----ATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTA 57977 | | ||| | |||| ||| | || |||||| ||| ||| ||||||| | | Sbjct 580745 CCAACTGGGCGCTCAAGTGGTGCGACAACAAGCGC----GCCGCGTACGCCGAGCGCATC 580800 Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTG 58036 |||||||||||||||| ||||| || ||||| || || || ||| || | ||||| Sbjct 580801 GTCGCGTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGTTCGTTCTGCTCCA-TCTTTTG 580859 Query 58037 GATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGA 58096 | | ||||| ||||| || ||||| |||||| |||| ||||| | || |||||||| Sbjct 580860 GCTCAAGAAGCGCGGGCTCATGCCGGGCCTGTCGTTCTCGAACGAACTCATCTCGCGCGA 580919 Query 58097 CGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC 58156 ||| || || || || ||||| ||| | |||||||| | | ||||| || | | | Sbjct 580920 CGAAGGCCTGCACTGCGACTTTGCATGCTTGATGTACTCGAAGCTCGTCAACAAGCTGTC 580979 Query 58157 GCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | |||||| || ||| || ||| || || | |||||| || ||||||| | Sbjct 580980 GGACACGCGCATCCACGAGATTGTCGGCGATGCCGTTGAGATCGAGAAGCAGTTTGTGAG 581039 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| | | || |||| | | || |||||| | | |||| | |||||||| Sbjct 581040 CGAGAGCTTGCCCGTGGAACTCATTGGCATGAACTCGGCGCTCATGTGCGAATACATTGA 581099 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAG------AGCGTCATTACAACAC 58330 ||| ||||| | | | |||||| | |||| | ||| || || | | Sbjct 581100 GTTCTGCGCCGATCGCC---TCCTCGAATCGCTTGGCGCCCCCAAGC-TCTTTGC--GGC 581153 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || || ||||| | ||| | ||||||| | | ||||| || ||||||||||| Sbjct 581154 CAAGAACCCCTTTGACTGGATGGACATGATCTCATTGCAAGGCAAAACCAACTTTTTCGA 581213 Query 58391 AAA 58393 || Sbjct 581214 GAA 581216 >seq41 Length=515451 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || ||||| ||||| |||||||||||||| |||||||||| || || Sbjct 382127 ATGCAAATCTTTGTCAAGACACTGACGGGCAAAACGATCACTCTCGACGTTGAGCCCTCG 382068 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | ||||| || | || |||||||||||| | || || || ||| Sbjct 382067 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAGGAAGGAATCCCTCCTGATCAG 382008 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || || || || || || |||||||| | || |||||||||| ||| Sbjct 382007 CAACGCCTCATCTTTGCGGGAAAGCAACTGGAAGACGGTCGCACCCTGAGCGATTACAAC 381948 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTAG 31422 || || || || ||||| || ||| |||| | | || | |||||||| Sbjct 381947 ATCCAGAAGGAGTCGACCCTGCATTTGGTGTTGCGCCTCCGTGGCGGTAG 381898 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247 ||| ||||||||| ||||| ||||| || || ||||| || || ||| ||||||| || | Sbjct 383145 CAACCATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATTACCCTCGACGTCGAGC 383086 Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307 | || ||| |||| | ||||| |||| || ||||||||||||| | || || | Sbjct 383085 CCTCGGACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCGG 383026 Query 31308 ACCAGCAGCGTCTAATATTCGC 31329 |||| ||||| || || || || Sbjct 383025 ACCAACAGCGCCTTATCTTTGC 383004 >seq34 Length=561022 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| |||||||| |||||| |||| || || || ||||| | ||||| ||||| Sbjct 36113 AAATATGCAGATTTTCGTCAAGACTTTGACTGGGAAGACCATCACGTTGGACGTGGAACC 36172 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| | || | ||||| || | || |||||||||||| | ||||| || Sbjct 36173 GTCCGACTCGATTGACAACGTCAAGCAAAAGATCCAAGACAAGGAAGGCATCCCGCCTGA 36232 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| | || || || ||||| || |||||||| || ||||||| || Sbjct 36233 CCAGCAGCGCTTGATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACCTTGAGCGACTA 36292 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| |||||||| | || |||| || | ||| | || ||| Sbjct 36293 CAACATCCAAAAGGAATCGACGTTGCACTTGGTGCTCCGCCTGCGCGGTGGT 36344 >seq7 Length=1798773 Score = 129 bits (142), Expect = 5e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| |||| || || || ||||| ||||||| ||||| || Sbjct 108712 CATGCAAATCTTCGTGAAGACGTTGACGGGAAAGACCATCACGCTCGACGTGGAACCTTC 108771 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || | || |||||||||||| | || || ||||| Sbjct 108772 CGACTCGATTGACAACGTGAAGCAAAAGATTCAAGACAAGGAAGGCATTCCCCCTGACCA 108831 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || |||||||| |||||||||||| || | ||||| || || Sbjct 108832 GCAGCGTTTGATCTTTGCTGGCAAGCAGTTGGAAGACGGCCGCACGCTCAGCGACTACAA 108891 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||| ||||| || || || || ||| |||| ||| Sbjct 108892 CATCCAAAAGGAGTCCACCCTCCATTTGGTCCTT 108925 Score = 118 bits (130), Expect = 9e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| || || ||||| || ||||| ||||||| ||||| || Sbjct 108484 CATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACGCTCGACGTGGAACCTTC 108543 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || | || |||||||||||| | || || ||||| Sbjct 108544 CGACTCGATTGACAACGTGAAGCAAAAGATTCAAGACAAGGAAGGCATTCCCCCTGACCA 108603 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || |||||||| |||||||||||| || | ||||| || || Sbjct 108604 GCAGCGTTTGATCTTTGCTGGCAAGCAGTTGGAAGACGGCCGCACGCTCAGCGACTACAA 108663 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| ||||| || || || || || |||| || Sbjct 108664 CATCCAAAAGGAGTCCACCCTCCACTTGGTGCT 108696 >seq14 Length=1282488 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| |||| || ||||| ||||| | || || ||||| || Sbjct 735057 CATGCAAATCTTCGTCAAGACGTTGACGGGGAAAACCATCACGTTGGATGTGGAACCATC 734998 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || | || |||||||||||| | || || ||||| Sbjct 734997 CGACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGGATTCCCCCGGACCA 734938 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || || || || || ||||| || ||||||||| || |||| || || || Sbjct 734937 GCAACGCCTCATCTTTGCCGGCAAGCAATTGGAAGACGGCCGCACGTTGAGTGACTACAA 734878 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| ||||| |||||||| Sbjct 734877 CATCCAAAAGGAATCGAC 734860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445761747313200