Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq7 84.2 2e-11 >seq7 Length=1798773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575 ||| || || || ||| ||||||||| |||||||| || || | || || |||| | Sbjct 108694 CACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTC-GCTGAGCGTGCGGCCGTCTT 108636 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 ||| |||||| || | | || ||||||||||| || || | | ||||||||| Sbjct 108635 CCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCTT 108576 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||| || ||||| | | || | |||| || ||| |||| || ||||| | Sbjct 108575 GAATCTTTTGCTTCACGTTGTCAATCGAGTCGGAAGGTTCCACGTCGAGCGTGATGGTCT 108516 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 | |||||||| || || ||||| |||||||| ||| Sbjct 108515 TGCCGGTGAGGGTCTTGACAAAGATCTGCATGGTG 108481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421246913110835