Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 199 1e-45 >seq2 Length=2059303 Score = 199 bits (220), Expect = 1e-45 Identities = 250/342 (73%), Gaps = 1/342 (0%) Strand=Plus/Minus Query 363543 TGTA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601 |||| ||||| ||||| || || || ||| ||| || || || | | ||| || ||| Sbjct 918278 TGTACTTCACCCACGCGACCCCGACCTTGTTCAACGCCGGCACGCCTCGTCCTCAACTGT 918219 Query 363602 CTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTA 363661 | || ||||| || | |||||||||||||||||||| ||||||| |||||| | | Sbjct 918218 CGTCGTGCTTCCTCTTGTCCATGAAGGACGATTCCATCGAAGGTATCTACGACACATTGA 918159 Query 363662 AGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTC 363721 |||| ||||| ||||||||| || ||||| ||||| || |||||||| | | Sbjct 918158 AGAACTGTGCGTGCATTTCCAAGTGGGCTGGCGGCATTGGCGTGAACATCCACAACATCC 918099 Query 363722 GTGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGC 363781 | || ||||| ||||||||||| || || | ||| || ||| | ||||||||| Sbjct 918098 GCGCCACCAACAGCTACATTCGCGGGACCAACGGGTCCTCCAACGGGATCATTCCCATGC 918039 Query 363782 TTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGG 363841 |||| ||||| || | ||||| | ||||| ||||| || || ||||||||||| ||| Sbjct 918038 TTCGGGTGTTCAACGACACTGCTCGCTACGTGGACCAAGGCGGGGGAAAGCGCAAGGGGT 917979 Query 363842 CGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTG 363883 |||| || ||||| | |||||| |||||||| || |||| Sbjct 917978 CGTTCGCCATGTACTTGGAGCCTTGGCATGCCGACATCTTTG 917937 Score = 176 bits (194), Expect = 1e-38 Identities = 539/825 (65%), Gaps = 20/825 (2%) Strand=Plus/Minus Query 364072 AAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCC 364131 ||||| || ||||| || || || ||||| || || ||| || | ||||| ||| Sbjct 917687 AAGTACGAGTCGGAAGGCCGTGCGCGCAAGACGATCAAGGCGCAGCAGTTGTGGTTCGCC 917628 Query 364132 ATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191 ||| |||| ||||| | || || || || || || ||| ||||||| ||| |||||||| Sbjct 917627 ATCTTGGAGTCGCAAGTCGAAACCGGCACGCCGTACATGCTGTACAAGGATGCGTGCAAC 917568 Query 364192 CGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATT 364251 ||||||||||||||||| |||| || || || || | |||| | || |||||| Sbjct 917567 GGCAAGTCCAACCAGCAGAACCTGGGCACGATCAAGTCGTCCAACTTGTGCTGCGAGATC 917508 Query 364252 ATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 || || ||||| ||||| ||||| || ||| | ||||| |||||||| | Sbjct 917507 ATCGAGTACACGAGCAAGGACGAAGTGGCCGTGTGCAACTTGGCGTCCATCGCGCTGTCC 917448 Query 364312 GCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT 364371 |||||| | | | | |||||| || || | | | || | | Sbjct 917447 AAGTTTGTCGAGAACGCTGTGTTTGACTTTGCACACCTGCACAAGATCGCCAAGGTGGTC 917388 Query 364372 ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG---- 364426 || ||| ||| ||||||| |||||| || ||||| || || | ||||| || Sbjct 917387 ACGACCAACCTCAACAAGGTGATCGACGTCAACTATTACCCCATCCAAGAAGCGCGCAAC 917328 Query 364427 AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTT 364486 ||| || ||||| || |||||||| || |||| || || ||||| || |||| | Sbjct 917327 AGC-----AACATGCGCCACCGCCCGATCGGGATTGGCGTCCAAGGCCTTGCCGACGCGT 917273 Query 364487 TTATGATGCTCAAGATG---GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGA 364543 | || |||| | | | || || ||| || || || || || || ||| Sbjct 917272 ---TCATCCTCATGGGGTACTCGTTCGAGTCGGTGGAAGCCAAGGTGCTGAACCAGCAGA 917216 Query 364544 TCTTTGAAACAATGTATTTTGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAG 364602 |||||||||| || || ||||| || || | | || | | | ||| | ||||| Sbjct 917215 TCTTTGAAACCATCTACCACGCCGCCATGGAAACGTCCATGGAACTCGCCAAGAGCCAAG 917156 Query 364603 GGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTA 364662 || |||| || || ||||| ||||| | ||||| || ||||||| || | Sbjct 917155 GG-CCGTACGAGACCTACGAGGGCTCCCCCGTGAGTCAGGGCAAGTTCCAGTACGACTTG 917097 Query 364663 TGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAA 364721 ||| |||||||| || | | ||| |||||| |||| | | ||| || | Sbjct 917096 TGGGGCGTCACGCCGTCGGATCTGTGGGACTGGGCGTCGCTCAAGGCGCAA-GTGGCCCA 917038 Query 364722 GCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGAT 364781 ||| || | |||||||| || | || |||||||||||||| || || || ||||| Sbjct 917037 GCACGGCATCCGCAACTCGCTGCTCTTGGCCCCCATGCCCACGGCGTCCACCGCGCAGAT 916978 Query 364782 CCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCT 364841 |||||| |||||||| | |||| |||||||| ||| | || ||||| || || Sbjct 916977 CCTCGGCAACAACGAATCAATCGAGCCGTTTACGTCCAACATGTACAGCCGCCGCGTCCT 916918 Query 364842 TTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCT 364886 | || ||||| | | ||||| |||||| | | ||||| || Sbjct 916917 CGCGGGCGAATTCACCATCGTTAACAAGTACTTGATGAAGGAGCT 916873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303339656152970