Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 163 3e-35 seq34 134 1e-26 seq7 134 1e-26 seq41 131 2e-25 seq18 118 1e-21 seq14 96.9 3e-15 >seq2 Length=2059303 Score = 163 bits (180), Expect = 3e-35 Identities = 632/978 (65%), Gaps = 24/978 (2%) Strand=Plus/Plus Query 145033 GATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACG 145092 ||||| || | || ||||||| || |||| || ||||| || | || || || Sbjct 916869 GATCAGCTCCTTCATCAAGTACTTGTTAACGATGGTGAATTCGCCCGCGAGGACGCGGCG 916928 Query 145093 CAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGT 145152 |||| ||| ||||| || || || | || ||||| ||||| ||||| || ||||| Sbjct 916929 GCTGTACATGTTGGACGTAAACGGCTCGATTGATTCGTTGTTGCCGAGGATCTGCGCGGT 916988 Query 145153 CGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTC 145212 | || ||||||||| |||| | | || ||||| | |||||||| | | Sbjct 916989 GGACGCCGTGGGCATGGGGGCCAAGAGCAGCGAGTTGCGGATGCCGTGCTGGGCCACTTG 917048 Query 145213 TTCCTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTG 145272 |||| |||| |||| ||||| || | |||| | ||| |||||| ||||||||| Sbjct 917049 CGCCTTGAGCGACGCCCAGTCCCACAGATCCGACGGCGTGACGCCCCACAAGTCGTACTG 917108 Query 145273 CAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGG 145331 || |||||| || ||||| ||| | ||| ||| | |||| | | |||| Sbjct 917109 GAACTTGCCCTGACTCACGGGGGAGCCCTCGTAGGTCTCGTA-CGGCCCTTGGCTCTTGG 917167 Query 145332 CGAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGA 145391 |||| || || |||| ||| || || || || || || ||| ||| | Sbjct 917168 CGAGTTCCATGGACGTTTCCATGGCGGCGTGGTAGATGGTTTCAAAGATCTGCTGGTTCA 917227 Query 145392 GCAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCC 145451 ||| | | ||||| | |||| ||| | || || | || || ||||| || | Sbjct 917228 GCACCTTGGCTTCCACCGACTCGAACGAGTACCCCATGAGGATGAACGCGTCGGCAAGGC 917287 Query 145452 CCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAG 145511 | || | || | ||||| || || || ||||||||| | | ||| | ||| | Sbjct 917288 CTTGGACGCCAATCCCGATCGGGCGGTGGCGCATGTTGCTGTTGCGCGCTTCTTGGATGG 917347 Query 145512 GATA-TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGC 145570 | || | | | ||| ||||| | || || | ||| | || ||||| | || | Sbjct 917348 GGTAATAGTTGACG-TCGATCACCTTGTTGAGGTTGGTCGTGACCACCTTGGCGATCTTG 917406 Query 145571 CGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCAC--ACAGCTATTGACGGCGA 145628 ||| | | ||||||||||| ||| | || || | | ||||| |||| Sbjct 917407 TGCAGGTGTGCAAAGTCAAACACAGCGTTCTCGACAAACTTGGACAGC--------GCGA 917458 Query 145629 TCGACGCCAAATTACAAACTGCCGTCTCCTCGGCG-TCGCTGTATTGTACGATCTCGGCG 145687 | |||||||| || || || ||| || || | ||| |||| | | ||||||| | Sbjct 917459 TGGACGCCAAGTTGCACACGGCCACTTCGTCCTTGCTCG-TGTACTCGATGATCTCGCAG 917517 Query 145688 CACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCG 145747 ||||| ||| | ||||| || ||||| || ||||| || || | ||||||||| Sbjct 917518 CACAAGTTGGACGACTTGATCGTGCCCAGGTTCTGCTGGTTGGACTTGCCGTTGCACGCA 917577 Query 145748 TCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGT 145805 |||||||| ||||||||||| ||| || || || |||| ||||| ||| ||| Sbjct 917578 TCCTTGTACAGCATGTACGGCGTGCCGGTTTCGACTTGCGACTCCAAGATGGCGAAC--C 917635 Query 145806 GCAAGTCCTGCG-CACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAG 145864 ||| | ||||| | | | | ||| | | ||||| || ||||| || | | Sbjct 917636 ACAACTGCTGCGCCTTGATCGTCTTGCGCGCA-CGGCCTTCCGACTCGTACTTGTGGAAC 917694 Query 145865 AGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTT-GTTGGGACACAT 145923 ||| |||| ||| ||| || |||| ||| ||| || || | ||| |||||||| | Sbjct 917695 AGCGCCTCGAACTCGGCGCCCCAGCATTCGTGCAGCCCCGG-CGCTTCATTGGGACAGAA 917753 Query 145924 CAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGC 145983 || ||| ||||||| | | |||||||| ||| |||| ||| || | ||||| || Sbjct 917754 CAAGCTCCAGTCGCCGTTCGACTCGACGCGCTTCATGAACAGATCCGGAATCCACATGGC 917813 Query 145984 GTACATCAAGTCGCGCGC 146001 ||| | ||||||||| || Sbjct 917814 GTAGAACAAGTCGCGGGC 917831 >seq34 Length=561022 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || ||||| || || | ||||| |||||||| |||||||| |||||| Sbjct 36343 CCACCGCGCAGGCGGAGCACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTC 36284 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||||| || |||| || ||||||||||| || ||| Sbjct 36283 AAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCGGG 36224 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||||| | || | | |||| | || | | Sbjct 36223 ATGCCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCACG 36164 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | ||| || |||||||||||||| Sbjct 36163 TCCAACGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAAATCTGCAT 36117 >seq7 Length=1798773 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||| ||||| || || | ||| ||||||||||| |||||||| ||||| Sbjct 108712 GCCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGCT 108653 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||| || | ||||||||| || |||| |||||||||||||| || || Sbjct 108652 GAGCGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGG 108593 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| || || ||||| | | || | | |||| | || | Sbjct 108592 AATGCCTTCCTTGTCTTGAATCTTTTGCTTCACGTTGTCAATCGAGTCGGAAGGTTCCAC 108533 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||||| || | ||| || ||||| || || || || || ||||||||| Sbjct 108532 GTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATG 108484 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || || || ||||| | ||| ||||||||||| |||||||| ||||| Sbjct 108939 CCTCCGCGAAGGCGAAGGACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTG 108880 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || | ||||||||| || |||| |||||||||||||| || || Sbjct 108879 AGCGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGGA 108820 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||||| | | || | | |||| | || | | Sbjct 108819 ATGCCTTCCTTGTCTTGAATCTTTTGCTTCACGTTGTCAATCGAGTCGGAAGGTTCCACG 108760 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| || || || | || || ||||| || |||||| Sbjct 108759 TCGAGCGTGATGGTCTTTCCCGTCAACGTCTTCACGAAGATTTGCATG 108712 >seq41 Length=515451 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||| ||| ||||| | |||||||||||| || |||||||||||||||| |||||| | Sbjct 381913 CGCAACACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCG 381972 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || || ||||| || || |||| | || ||||| || |||||||||||||| ||| Sbjct 381973 TCTTCCAGTTGCTTTCCCGCAAAGATGAGGCGTTGCTGATCAGGAGGGATTCCTTCCTTG 382032 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||||| | || | | || | || ||| | ||||| || | Sbjct 382033 TCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCAACGTCGAGAGTGATC 382092 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| || || || || || || || || ||||| Sbjct 382093 GTTTTGCCCGTCAGTGTCTTGACAAAGATTTGCAT 382127 >seq18 Length=978767 Score = 118 bits (130), Expect = 1e-21 Identities = 353/528 (67%), Gaps = 35/528 (7%) Strand=Plus/Plus Query 46084 ATGCCGTGCGT---GCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCA---GC 46137 || |||||||| ||||||| || |||||||| | |||||| | ||| || || Sbjct 580723 ATTCCGTGCGTCATGCGCAAGG---CCAACTGGGCGCTCAAGTGGTGCGACAACAAGCGC 580779 Query 46138 ACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCT 46197 ||||| | ||||||||| || || || || || ||||| ||| |||| || || Sbjct 580780 GCCGCG---TACGCCGAGCGCATCGTCGCGTTCGCCGCCGTGGAAGGCATCTTCTTCTCC 580836 Query 46198 GGCA-GTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGT 46255 || ||| ||| ||||||||| |||| || | |||| ||||||| |||||| ||| Sbjct 580837 GGTTCGTTCTGCT-CCATCTTTTGGCTCAAGAAGCGCGGGC-TCATGCCGGGCCTGTCGT 580894 Query 46256 TTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTG---TCTCT 46312 | ||||| || || ||||||||||| |||||||| |||||||| || | | Sbjct 580895 TCTCGAACGAACTCATCTCGCGCGACGAAGGCCTGCACTGCGACTTTGCATGCTTGATGT 580954 Query 46313 ACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACAC---CGTGC-TGAGCATGTTC 46368 ||| || |||| | ||||||| | | ||||| | | | ||| || || Sbjct 580955 ACTCGAA-GCTCG-----TCAACAAGCT---GTCGGACACGCGCATCCACGAG-ATTGTC 581004 Query 46369 AAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA-CGGCCGCACTGCCCGCTGCCCTGCT 46427 || || || | || |||||| ||||| | | || || |||||| | || | Sbjct 581005 GGCGATGCCGTTGAGATCGAGAAGCAGTTTGTGAGCGAGAGC-TTGCCCGTGGAACTCAT 581063 Query 46428 GGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 ||||||||| | | |||||||| ||||| ||||| || || || || |||| Sbjct 581064 TGGCATGAACTCGGCGCTCATGTGCGAATACATTGAGTTCTGCGCCGATCGCCTCCTCGA 581123 Query 46488 GCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACAT 46547 |||| | || |||| ||| || || || ||||| | ||| ||| || Sbjct 581124 ATCGCTTGGCGCCCCCAAGCTCTTTGCGGCCAAGAACCCCTTTGACTGGATGGACATGAT 581183 Query 46548 CTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||| || | |||||||| || |||||||| |||||||| |||||||| Sbjct 581184 CTCATTGCAAGGCAAAACCAACTTTTTCGAGAAGCGCGTGGGCGAGTA 581231 >seq14 Length=1282488 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||| |||||||| |||||||| || ||| Sbjct 734830 CCACCACGCAGGCGGAGCACGAGGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCACTC 734889 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || | |||||||| || |||| | || ||||||||||| || Sbjct 734890 AACGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCCGGGGGA 734949 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | | || | | |||| | || | Sbjct 734950 ATCCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTGTCGATCGAGTCGGATGGTTCCACA 735009 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | |||||| || || | || || ||||| || |||||| Sbjct 735010 TCCAACGTGATGGTTTTCCCCGTCAACGTCTTGACGAAGATTTGCATG 735057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007873366400