Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 3e-11 >seq10 Length=1517454 Score = 84.2 bits (92), Expect = 3e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 126202 GCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGC 126261 |||| ||||| || |||| | |||||||||||||||||| ||| ||| || || Sbjct 322449 GCCGCGTCCTTCCCGCCCTGGAGCCGCGTGCCAAACTGACCAGACGGAACCAGCAGTGGC 322508 Query 126262 ACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGT-CTCGCACAGGTTCTG 126320 || ||||||| || || ||||||||||| | |||||||| || ||| | || | Sbjct 322509 ACGTTGTTGGAGCCGACGAAGTCCTGCGCCATGTTGACAATCGTGCTC-AATAGCGACGC 322567 Query 126321 CTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGAT 126380 ||||||||| | ||| | || || ||||| ||| ||| ||| || || || || || Sbjct 322568 CTCGCCGTGATGGTACGCCGTGTGTTCGGCGCAGTACCCGGCCAGTTGGGCGACTTTCAT 322627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611385618596000