Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7 91.5 1e-13 >seq7 Length=1798773 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 ||||||| | || || || |||| ||| || ||| |||||| || |||||||| || | Sbjct 108941 AACCTCCGCGAAGGCGAAGGACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTC-G 108883 Query 33959 CCAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACC 34017 | | || || |||| ||||| |||||||| ||||| |||| |||||||| || Sbjct 108882 CTGAGCGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGG 108823 Query 34018 GGCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTA-TCAGTAGATTC 34076 || | || || ||||| ||| |||||||| | | ||| | | || | || ||| Sbjct 108822 GGAATGCCTTCCTTGTCTTGAATCTTTTGCTTCACGTTG-TCAATCGAGTCGGAAGGTTC 108764 Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 |||| ||| || || ||||| || | || ||||| ||||||||||| Sbjct 108763 CACGTCGAGCGTGATGGTCTTTCCCGTCAACGTCTTCACGAAGATTTGCAT 108713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397058359269670