Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 275 6e-69 >seq2 Length=2059303 Score = 275 bits (304), Expect = 6e-69 Identities = 781/1191 (66%), Gaps = 32/1191 (3%) Strand=Plus/Minus Query 94237 AAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCA 94296 |||||||||||||| || ||| | | ||| | ||| | |||||||| | ||| | || Sbjct 917858 AAGAACCACGGCAATGAACTGCATCGTGCCCGCGACTTGTTCTACGCCATGTGGATTCCG 917799 Query 94297 GACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || || || ||||| ||||||||| ||| || |||||| | || |||||||||||| Sbjct 917798 GATCTGTTCATGAAGCGCGTCGAGTCGAACGGCGACTGGAGCTTGTTCTGTCCCAATGAA 917739 Query 94357 TGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGT-TACGA 94415 || || ||| ||| || || | || || | ||| | | | ||||| Sbjct 917738 GCGCCGGGGCTGCACGAATGCTGGGGCGCCGAGTTCGAGGCGCTGT-TCCACAAGTACGA 917680 Query 94416 ATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGA 94475 ||| | ||| || | ||| || | || | || ||||| ||| |||| Sbjct 917679 GTCGGAAGGCCGTGCGCGCAAGACGATCAAGGCGCAGCAGTTGTGGTTCGCCATCTTGGA 917620 Query 94476 CGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTC 94535 || || || || || ||||| ||||| ||| |||||| | ||||| |||||| Sbjct 917619 GTCGCAAGTCGAAACCGGCACGCCGTACATGCTGTACAAGGATGCGTGCAACGGCAAGTC 917560 Query 94536 CAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTA 94595 |||||||||| |||| || ||||||| || || ||||| |||||| ||||||| Sbjct 917559 CAACCAGCAGAACCTGGGCACGATCAAGTCGTCCAACTTGTGCTGCGAGATCATCGAGTA 917500 Query 94596 TACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT 94655 || |||||| | || ||||| ||| ||| |||||| ||||||| || || Sbjct 917499 CACGAGCAAGGACGAAGTGGCCGTGTGCAACTTGGCGTCCATCGCGCTGTCCAAGTTTGT 917440 Query 94656 GCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGG 94715 ||||| || ||| ||| || | | | || || |||| Sbjct 917439 -CGAGA-------------AC-GCTGTGTTTGACTTTGCACACCTGCACAAGATCGCC-- 917397 Query 94716 AAGGATGGTCTTGA---ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGA 94772 |||| ||||| || |||| |||| ||| |||||| |||| |||||| ||| || Sbjct 917396 AAGG-TGGTCACGACCAACCTCAACAAGGTGATCGACGTCAACTATTACCCCATCCAAGA 917338 Query 94773 GGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGA 94832 ||| ||| ||| || || || || ||||| || |||||||| || | || || Sbjct 917337 AGCGCGCAACAGCAACATGCGCCACCGCCCGATCGGGATTGGCGTCCAAGGCCTTGCCGA 917278 Query 94833 CGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAA 94892 |||| | | | ||| | | | ||| || || || || || |||| | | Sbjct 917277 CGCGTTCATCCTCATGGGGTACTCGTTCGAGTCGGTGGAAGCCAAGGTGCTGAACCAGCA 917218 Query 94893 CATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCA-GATCGG 94951 || || |||| ||| || ||| |||||| || ||| | | | |||| || | Sbjct 917217 GATCTTTGAAACCATCTACCACGCCGCCATGGAAACGTCCATGGAACTCGCCAAGAGCCA 917158 Query 94952 ACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCG 95011 | ||||| |||| | | | || || ||| || ||||||| || |||| || Sbjct 917157 A----GGGCCGTACGAGACCTACGAGGGCTCCCCCGTGAGTCAGGGCAAGTTCCAGTACG 917102 Query 95012 ACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAA--GCTCTACGCGCTGATGT 95069 || | ||||| || | ||| |||| ||||| ||||||| |||| | |||| | || Sbjct 917101 ACTTGTGGGGCGTCACGCCGTCGGATCTGTGGGACTGGGCGTCGCTCAAGGCGC--AAGT 917044 Query 95070 TATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGC 95129 | | ||||| | ||| ||||||| ||||||||||||||||||| ||||| || Sbjct 917043 GGCCCAGCACGGCATCCGCAACTCGCTGCTCTTGGCCCCCATGCCCACGGCGTCCACCGC 916984 Query 95130 GCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCG 95189 ||||||||| ||||||||||| || |||| || || || |||||| |||||| | | || Sbjct 916983 GCAGATCCTCGGCAACAACGAATCAATCGAGCCGTTTACGTCCAACATGTACAGCCGCCG 916924 Query 95190 GGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCT 95249 || ||||| || |||||| || || | |||||| || | | ||| |||| || || Sbjct 916923 CGTCCTCGCGGGCGAATTCACCATCGTTAACAAGTACTTGATGAAGGAGCTGATCTCGCT 916864 Query 95250 GGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAA 95309 |||| ||||| | | ||| ||||| | | | | | |||| ||| || || Sbjct 916863 GGGTCTGTGGAACAGCGACGTCCGCAACCAGATCTTGCATGACCGCGGCAGCGTTCAAAA 916804 Query 95310 CATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCA 95369 | || || || || | | || |||||| | |||||||| |||||||||||| ||| Sbjct 916803 CGTCGCGTCCATCCCCGCGAACGTCAAGGAAGTGTACAAGACTGTGTGGGAGATCAAGCA 916744 Query 95370 GCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAG 95420 || | |||||| || |||| |||||| | ||||||||||| || Sbjct 916743 AAAGGTCGTGCTCGACTTGGCCGCCGACCGCGGTGCGTTCATCTGCCAAAG 916693 Score = 158 bits (174), Expect = 1e-33 Identities = 334/496 (67%), Gaps = 2/496 (0%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||| ||||||| ||||||||| |||| ||||||||| | || ||| | || | Sbjct 918438 TACGACTACTTTGGCTTCAAAACGTTGGAAAAGTCGTACTTGCTTCGCGTGGGCGACAAG 918379 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | |||||| || || || || | |||||||| || | || || || | ||| Sbjct 918378 GTGTGCGAGCGCCCCCAACACTTGATCATGCGCGTGGCTGTGGGCATCCATAAAGAAGAC 918319 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG-ACATGCGGGACAAGAGGTATACCATGGCCAC 93896 || | || || | | | ||| ||||| | | | | ||| || || Sbjct 918318 ATTGAGTCGGTGCTGACCACGTAC-GAGTACATGTCGCAATTGTACTTCACCCACGCGAC 918260 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 ||||||| |||||||||| || || || || || |||| ||||| ||||| || | Sbjct 918259 CCCGACCTTGTTCAACGCCGGCACGCCTCGTCCTCAACTGTCGTCGTGCTTCCTCTTGTC 918200 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| |||||| || || | ||||| | ||| |||||||| ||| || Sbjct 918199 CATGAAGGACGATTCCATCGAAGGTATCTACGACACATTGAAGAACTGTGCGTGCATTTC 918140 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || | || || || || || | | ||||| || | || |||| |||||| Sbjct 918139 CAAGTGGGCTGGCGGCATTGGCGTGAACATCCACAACATCCGCGCCACCAACAGCTACAT 918080 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||||| ||||| || |||||||||| || | || ||||| ||||| |||||| || | Sbjct 918079 TCGCGGGACCAACGGGTCCTCCAACGGGATCATTCCCATGCTTCGGGTGTTCAACGACAC 918020 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || |||||||||||||| || || || | | | ||||| || ||||| | || | || Sbjct 918019 TGCTCGCTACGTGGACCAAGGCGGGGGAAAGCGCAAGGGGTCGTTCGCCATGTACTTGGA 917960 Query 94197 GCCCTGGCACGCGGAC 94212 ||| ||||| || ||| Sbjct 917959 GCCTTGGCATGCCGAC 917944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718036326600