Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 134 2e-26 seq18 132 6e-26 >seq2 Length=2059303 Score = 134 bits (148), Expect = 2e-26 Identities = 807/1277 (63%), Gaps = 44/1277 (3%) Strand=Plus/Plus Query 115526 TGAACTGAATGG-GTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGC 115584 |||||||||| | ||| || |||| || |||||||||||||| || ||||| | Sbjct 916556 TGAACTGAATCGCGTCA-GCTTTGGGGCGCGAGCGGAGGTAGTACATACCGGTCTTCAAG 916614 Query 115585 CCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATG 115644 || ||||||| ||||| | ||||| || | | ||| || |||| | ||| Sbjct 916615 CCGCGCTTCCACGCATAAAAGTGCATGGACGTGAGCTTACTGATGCTTGGGTCGGCGATG 916674 Query 115645 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATC 115704 | |||||| |||||| ||| |||||| || || || || |||| || | | Sbjct 916675 TGCACGTTCATGCTTTGGCTTTGGCAGATGAACGCACCGCGGTCGGCGGCCAAGTCGAGC 916734 Query 115705 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 115764 || |||| |||||| ||||||||||| |||| | | ||| | | | ||||| Sbjct 916735 ACGACCTTTTGCTTGATCTCCCACACAGTCTTGTACACTTCCTTGACGTTCGCGGGGATG 916794 Query 115765 TCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATG--AGATCC---TTCATA--TC 115817 | ||| ||||| | ||||| | |||| ||||| | | | || Sbjct 916795 GACGCGACGTTTTGAACG-------CTGCCGCGGTCATGCAAGATCTGGTTGCGGACGTC 916847 Query 115818 CTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAA 115877 | ||| ||||| | | | || |||| || | || ||| || || | || Sbjct 916848 GCTGTTCCACAGACCCAGCGAGATCAGCTCCTTCATCAAGTACTTGTTAACGATGGTGAA 916907 Query 115878 CTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATT 115937 || ||||||||| ||| | || ||||||| ||| | ||||| | | || || Sbjct 916908 TTCGCCCGCGAGGACGCGGCGGCTGTACATGTTGGACGTAAACGGCTCGATTGATTCGTT 916967 Query 115938 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCG 115997 ||| || | ||| || || ||||| || ||||||||||| |||| ||| || |||||| Sbjct 916968 GTTGCCGAGGATCTGCGCGGTGGACGCCGTGGGCATGGGGGCCAAGAGCAGCGAGTTGCG 917027 Query 115998 GAGACCCACC----CCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTG 116053 || || | || || |||| ||||||| | ||||||| | || | | Sbjct 917028 GATGCCGTGCTGGGCCACT--TGCG--CCTTGAGCGACGCCCAGTCCCAC---AGATCCG 917080 Query 116054 TCTCCC---CCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 116110 | | | |||||| || |||||| | || || | | || || ||||| Sbjct 917081 ACGGCGTGACGCCCCACAAGTCGTACTGGAACTTGCCCTGACTCACGGGGGAGCCCTCGT 917140 Query 116111 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 116170 | ||||| || || || | || || | ||| | || || | ||| ||||| | Sbjct 917141 AGGTCTCGTACGGCCCTTGGCTCTTGGCGAGTTCCATGGACGTTTCCATGGCGGCGTGGT 917200 Query 116171 ACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGAC 116230 | || || ||||| || | |||| ||||||| || | || || |||| | || Sbjct 917201 AGATGGTTTCAAAGATCTGCTGGTTCAGCACCTTGGCTTCCACCGACTCGAACGAGT-AC 917259 Query 116231 GGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 116289 || | || || | || || || |||||||| || | || || ||||| || | | Sbjct 917260 CCCATGAGGATGAACGCGTCGGCAAGGCCTTGGACGCCAATCCCGATCGGGCGGTGGCGC 917319 Query 116290 ATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 116349 || || || || || | | ||| ||| | || ||||| ||| | || || Sbjct 917320 ATGTTGCTGTTGCGCGCTTCTTGGATGGGGTAATAGTTGACGTCGATCACCTTGTTGAGG 917379 Query 116350 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAA-ACTGCGAGTCTC 116408 || | ||||| ||||| | ||| | || || | | | | ||||| || ||| |||| Sbjct 917380 TTGGTCGTGACCACCTTGGCGATCTTGTGCAGGTGTGCAAAGTCAAACACAGCGT-TCTC 917438 Query 116409 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 116468 |||| |||| | || ||||| ||||||| || ||||| | || ||||| Sbjct 917439 ------GACAAACTTGGACAGCGCGATGGACGCCAAGTTGCACACGGCCACTTCGTCCTT 917492 Query 116469 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 116528 |||||||| || || || ||||| || || ||| || ||||||| ||||| Sbjct 917493 GCTCGTGTACTCGATGATCTCGCAGCACAAGTTGGACGACTTGATCGTGCCCAGGTTCTG 917552 Query 116529 TTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGT 116588 || || ||||| ||| |||||||||||||| ||||| || ||||| || || || Sbjct 917553 CTGGTTGGACTTGCCGTTGCACGCATCCTTGTACAGCATGTACGGCGTGCCGGTTTCGAC 917612 Query 116589 TTGGGACTTGAGAATAGCCTTCCA-TACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 116647 ||| |||| | || || ||| || | ||| || | | || | || || | Sbjct 917613 TTGCGACTCCAAGATGGCGAACCACAACTGCTGCGCCTTG-ATCGTCTTGCGCGCACGGC 917671 Query 116648 CCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAG-AGC 116706 | ||| ||||||||| | | || ||||| ||||| | ||| |||| | | | ||| Sbjct 917672 CTTCCGACTCGTACTTGTGGAACAGCGCCTCGAACTCGGCGCCC-CAGCATTCGTGCAGC 917730 Query 116707 CCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATG 116766 || || || | || |||||||| | ||| | || | ||| || ||||||||| Sbjct 917731 CCCGGCGCTTCATTGGGACAGAACAAGCTCCAGTCGCCGTTCGACTCGACGCGCTTCATG 917790 Query 116767 AAGAGGTCTGGGATCCA 116783 || || || || ||||| Sbjct 917791 AACAGATCCGGAATCCA 917807 Score = 134 bits (148), Expect = 2e-26 Identities = 288/427 (67%), Gaps = 5/427 (1%) Strand=Plus/Plus Query 116856 GATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGC 116912 ||| || || ||||| || |||| ||||| |||| ||||||||||| | || | Sbjct 917941 GATGTCGGCATGCCAAGGCTCCAAGTACATGGCGAACGACCCCTTGCGCTTTCCCCCGCC 918000 Query 116913 CTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGA 116972 |||| || || | || || |||| || || |||||||| |||||||| || | || Sbjct 918001 TTGGTCCACGTAGCGAGCAGTGTCGTTGAACACCCGAAGCATGGGAATGATCCCGTTGGA 918060 Query 116973 TTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACC 117032 || || ||||| ||||| ||| |||| | || | |||||||| || || Sbjct 918061 GGACCCGTTGGTCCCGCGAATGTAGCTGTTGGTGGCGCGGATGTTGTGGATGTTCACGCC 918120 Query 117033 AATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATC 117092 ||| || || |||||||| || || || || | | | | || ||||||| || || Sbjct 918121 AATGCCGCCAGCCCACTTGGAAATGCACGCACAGTTCTTCAATGTGTCGTAGATACCTTC 918180 Query 117093 GATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACC 117152 ||| || || |||| | | | ||||||||| ||||| ||| || | || || || Sbjct 918181 GATGGAATCGTCCTTCATGGACAAGAGGAAGCACGACGACAGTTGAGGACGAGGCGTGCC 918240 Query 117153 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTGGGACATCTTATCGTAGG 117211 |||||||| | ||| || ||||||||| |||| ||| ||| ||||| | ||||| | Sbjct 918241 GGCGTTGAACAAGGTCGGGGTCGCGTGGGTGAA-GTACAATTGCGACATGTACTCGTACG 918299 Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271 | || || || ||||||||| || || || | | || ||||| | || || Sbjct 918300 TGGTCAGCACCGACTCAATGTCTTCTTTATGGATGCCCACAGCCACGCGCATGATCAAGT 918359 Query 117272 ATTgggg 117278 |||||| Sbjct 918360 GTTGGGG 918366 >seq18 Length=978767 Score = 132 bits (146), Expect = 6e-26 Identities = 342/508 (67%), Gaps = 20/508 (4%) Strand=Plus/Minus Query 127225 CTTGCCGTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATT 127284 |||| ||| || || || ||||||||||| ||||| || || || | | ||| | Sbjct 581238 CTTGGAGTACTCGCCCACGCGCTTCTCGAAAAAGTTGGTTTTGCCTTGCAATGAGATCAT 581179 Query 127285 CTCCATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTT--GGCACCCCAATCTGTTTG 127342 ||||| | ||||| |||||||| | |||| | | || | |||| | || | Sbjct 581178 GTCCATCCAGTCAAAGGGGTTCTTGGCCG--CAAAGAGCTTGGGGGCGCCAAGCGATTCG 581121 Query 127343 AGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATG 127402 ||||| ||||| | | | |||||||||| || |||| | | |||||||| || ||| Sbjct 581120 AGGAGGCGATCGGCGCAGAACTCAATGTATTCGCACATGAGCGCCGAGTTCATGCCAATG 581061 Query 127403 AGGTTACATGGG--AGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTA 127460 || || || ||| ||| | || | ||| |||||| || || || || || | | Sbjct 581060 AG-TTCCACGGGCAAGCTC-TCGCTCACAAACTGCTTCTCGATCTCAACGGCATCGCCGA 581003 Query 127461 CGATGGCGTGAATA---GTGTCCACCCCAGGTCTATTG-CGTAAAGTCTTGAAGAGTTCC 127516 | || |||| || |||||| | || | | ||| || || | || | || Sbjct 581002 CAATCTCGTGGATGCGCGTGTCCGAC--AGCT-TGTTGACG---AGCTTCGAGTACATCA 580949 Query 127517 A-CA-GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACA 127574 | || ||||| || ||| || || ||||| || ||||||||||| |||||||| ||| Sbjct 580948 AGCATGCAAAGTCGCAGTGCAGGCCTTCGTCGCGCGAGATGAGTTCGTTCGAGAACGACA 580889 Query 127575 GACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGA 127634 | || |||||||| || |||||||| | ||| || || | || || || || ||||||| Sbjct 580888 GGCCCGGCATGAGCCCGCGCTTCTTGAGCCAAAAGATGGAGCAGAACGAACCGGAGAAGA 580829 Query 127635 AGATCCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTAT 127694 |||| || ||||| |||||||| | | |||||||| | | | | ||| | | Sbjct 580828 AGATGCCTTCCACGGCGGCGAACGCGACGATGCGCTCGGCGTACGCGGCGCGCTTGTTGT 580769 Query 127695 CAAACCACTTCATCGCCCACTGTGCCTT 127722 | ||||||| | |||||| | ||||| Sbjct 580768 CGCACCACTTGAGCGCCCAGTTGGCCTT 580741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613500796518600