Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq103 104 2e-16 >seq103 Length=160417 Score = 104 bits (114), Expect = 2e-16 Identities = 448/696 (64%), Gaps = 18/696 (3%) Strand=Plus/Minus Query 518020 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 518079 ||| || || ||||||||||| ||||| | || | || | || || | |||| || Sbjct 91833 ACGGTTGTCGAAATCTTCACCACCCAAGTGCGTGTCACCGGCAGTTGCCTTCACTTCAAA 91774 Query 518080 AAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAAT 518139 | || ||||| | | ||| | || |||||| ||| || || |||| || ||||| Sbjct 91773 GATGCCTTCTTCGATCGTCAACAAAGACACATCAAAGGTCCCGCCGCCCAAGTCGAAAAT 91714 Query 518140 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 518199 | || || ||| | | || || || | ||| ||||| | || || || || Sbjct 91713 CAACACGTTGCGTTC---GCCACCCTTCTTGTCCAAACCGTACGCGATGGCGGCGGCCGT 91657 Query 518200 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 518259 ||||| || || || | ||| || || || |||||||| || || || || || || Sbjct 91656 GGGTTCGTTGATGATACGCAACACGTTCAGGCCAGCAATGGCACCGGCGTCCTTGGTCGC 91597 Query 518260 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTT 518319 ||| | ||| || |||||||| || ||||| || || || ||||| | | || Sbjct 91596 TTGGCGTTGCGAGTCGTTAAAGTACGCAGGCACCGTGATGACGGCGTTGTTCACCGTGGA 91537 Query 518320 ACCAATATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGT 518377 ||| |||| ||||| | | || ||||| || | || | ||| || || |||| | Sbjct 91536 ACC--GATAAACGCTTCCGACACTTCCTTCATCTTGATCAACACCATCGACGAGATTTCT 91479 Query 518378 TCTGG--GGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTA 518434 || || |||| | ||||| ||| |||| | || | | || || | Sbjct 91478 TCGGGCTGGAACGT--CTTGGTTTCGCCCTTGA-ACTCGACCGTGATTTGCGGCTTGTCG 91422 Query 518435 CC--AACAT-TAATAACTTTAAATGGCCAGTATTTCATATCTGATT-GAACACTTTGGTC 518490 || ||| | | || || || ||||||| || || || | || || ||| |||| Sbjct 91421 CCGGAACCTGGCGTCACCTTGAACGGCCAGTGCTTGATGTCGGCTTGGATCAC-AGGGTC 91363 Query 518491 ATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGC 518550 || || | | || || || || || || || || | || ||||| || || || || Sbjct 91362 GTTGAACTTGCGGCCGATCAAACGCTTGGCGTCGAACACCGTGTTGGTCGGGTTCATCGC 91303 Query 518551 AGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGA 518610 |||| | ||||| || || || |||| | || | || || |||| || || || Sbjct 91302 CACTTGGTTCTTGGCGGCGTCACCGATCAAGCGCTCGCTGTCCGTGAATGCCACGTACGA 91243 Query 518611 TGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATAC 518670 || || ||||| |||||||| || || ||||| ||||| || |||| |||||||| Sbjct 91242 AGGGGTCGTGCGGTTACCTTGGTCGTTGGCAATGATTTCCACGCGGTCATTCTGCCATAC 91183 Query 518671 ACCTACACAACTAAAAGTTGTTCCTAAATCAATACC 518706 ||| || || | | || || || | ||| ||||| Sbjct 91182 ACCCACGCAGGAATAGGTCGTGCCGAGATCGATACC 91147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780780964549510