Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq103 89.7 4e-12 >seq103 Length=160417 Score = 89.7 bits (98), Expect = 4e-12 Identities = 191/285 (67%), Gaps = 3/285 (1%) Strand=Plus/Minus Query 282187 ACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAA 282246 ||| || || ||||||||||| ||||| | || | || | || || | |||| || Sbjct 91833 ACGGTTGTCGAAATCTTCACCACCCAAGTGCGTGTCACCGGCAGTTGCCTTCACTTCAAA 91774 Query 282247 AAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAAT 282306 | || ||||| | | ||| | || |||||| ||| || || |||| || ||||| Sbjct 91773 GATGCCTTCTTCGATCGTCAACAAAGACACATCAAAGGTCCCGCCGCCCAAGTCGAAAAT 91714 Query 282307 AAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGT 282366 | || || ||| | | || || || | ||| ||||| | || || || || Sbjct 91713 CAACACGTTGCGTTC---GCCACCCTTCTTGTCCAAACCGTACGCGATGGCGGCGGCCGT 91657 Query 282367 TGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGC 282426 ||||| || || || | ||| || || || |||||||| || || || || || || Sbjct 91656 GGGTTCGTTGATGATACGCAACACGTTCAGGCCAGCAATGGCACCGGCGTCCTTGGTCGC 91597 Query 282427 TTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||| | ||| || |||||||| || ||||| || || || ||||| Sbjct 91596 TTGGCGTTGCGAGTCGTTAAAGTACGCAGGCACCGTGATGACGGC 91552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740589405028710