Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq41 131 2e-25 seq7 100 3e-16 >seq41 Length=515451 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 ||||| || ||||| | || || || || || |||||||||||||||| |||| | Sbjct 381913 CGCAACACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCG 381972 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| ||||| || || ||| |||| || ||||||||||| ||||| || ||||| ||| Sbjct 381973 TCTTCCAGTTGCTTTCCCGCAAAGATGAGGCGTTGCTGATCAGGAGGGATTCCTTCCTTG 382032 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || ||||| || | | || | || ||| | ||| || || || | ||| | | Sbjct 382033 TCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCAACGTCGAGAGTGATC 382092 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || ||||| |||| ||| || || || |||||||| Sbjct 382093 GTTTTGCCCGTCAGTGTCTTGACAAAGATTTGCAT 382127 >seq7 Length=1798773 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| || || | ||| | || || || | || || || ||||| |||||||| ||||| Sbjct 108712 GCCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGCT 108653 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | |||| |||||| | || || |||||| |||||| ||| ||||| || || || Sbjct 108652 GAGCGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGG 108593 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| ||| ||||| || | | || | || ||| | ||||| || Sbjct 108592 AATGCCTTCCTTGTCTTGAATCTTTTGCTTCACGTTGTCAATCGAGTCGGAAGGTTCCAC 108533 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | ||||||||||| | || || || || || ||||| Sbjct 108532 GTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCAT 108485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488538900822000