Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq10 118 1e-21 >seq10 Length=1517454 Score = 118 bits (130), Expect = 1e-21 Identities = 180/252 (71%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 147081 CTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAG 147140 |||||| |||||||| |||||||||||||| || || || | ||||| ||||| || || Sbjct 193926 CTGGCAAGAGAGCTCGCCGTCGGCCACGTAGAATTGACAAAACATGTGACACGGTGGAAG 193867 Query 147141 CGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGG 147200 ||||||| | || |||||| |||||||| ||||| | | | || | | | ||| Sbjct 193866 CGCCATGATGCCCAAGTCCGCAGGGTTCCACGCCGACAGAATGATGCGGCGGTCGTTGGG 193807 Query 147201 GTTCCTCTTAATCTCTTCGATAACCCACCT--CAGCTGGTCCACGCCCTGGCCCCCGTAG 147258 | | ||| || | | || | || || || || || ||| || ||| ||| Sbjct 193806 GGTGTGCTTGATTTTGTAAATGA--CATCTGCCAATTGATCGTGGCCTTGCCCCGTGTAA 193749 Query 147259 TTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGG 147317 | ||| ||| ||| | |||| |||| |||||||| | |||||||||||| |||||||| Sbjct 193748 TCTGT-GTGCATGTCGATGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGG 193690 Query 147318 CCCCAGGTCGCC 147329 |||| |||||| Sbjct 193689 ACCCAAGTCGCC 193678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583481909844000