Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F000520075.1_202014-01-14] 835 sequences; 75,844,385 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 5e-13 >seq2 Length=2059303 Score = 91.5 bits (100), Expect = 5e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 254897 GGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCCAGCGGCACACCGATTCGCTCGACG 254956 |||||| | || | |||||| |||| | ||||||| | || |||||| ||| Sbjct 918129 GGCGGCATTGGCGTGAACATCCACAACATCCGCGCCACCAACAGCTACATTCGCGGGACC 918070 Query 254957 AACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTAC 255016 ||||| | ||| || || || ||| | || ||||||||| || ||||||||| Sbjct 918069 AACGGGTCCTCCAACGGGATCATTCCCATGCTTCGGGTGTTCAACGACACTGCTCGCTAC 918010 Query 255017 GTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCAC 255076 || || ||||| || || || ||| || ||||| |||| ||| ||||||| ||||| Sbjct 918009 GTGGACCAAGGCGGGGGAAAGCGCAAGGGGTCGTTCGCCATGTACTTGGAGCCTTGGCAT 917950 Query 255077 GCCGACAT 255084 |||||||| Sbjct 917949 GCCGACAT 917942 Score = 87.8 bits (96), Expect = 6e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 256134 AGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCACCGCTCAAA 256193 ||||||| | |||||||||| | ||||| |||||||| || || |||||| || | Sbjct 917038 AGCACGGCATCCGCAACTCGCTGCTCTTGGCCCCCATGCCCACGGCGTCCACCGCGCAGA 916979 Query 256194 TCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGCGCCGCGTTC 256253 |||| || ||| ||| ||||| || | || ||||| | | | |||||||| | Sbjct 916978 TCCTCGGCAACAACGAATCAATCGAGCCGTTTACGTCCAACATGTACAGCCGCCGCGTCC 916919 Query 256254 GCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTACGACTCGGTC 256313 | | ||||| ||| || | || ||| |||||||| || | || || | || |||| Sbjct 916918 TCGCGGGCGAATTCACCATCGTTAACAAGTACTTGATGAAGGAGCTGATCTCGCTGGGTC 916859 Query 256314 TGTGGAAC 256321 |||||||| Sbjct 916858 TGTGGAAC 916851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588319007286575