Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1997 158 1e-33 >seq1997 Length=17169 Score = 158 bits (174), Expect = 1e-33 Identities = 312/457 (68%), Gaps = 6/457 (1%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 |||||| ||||| || ||||| || | || ||||| | ||| |||||||| || | Sbjct 5806 ACATCAAGCATGCAAAGTCGCAGTGCAGGCCTTCGTCGCGCGAGATGAGTTCGTTCGAGA 5865 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | | || || ||||| || || ||||| | |||||| || | | |||||| || | Sbjct 5866 ACGACAGGCCCGGCATGAGCCCGCGCTTCTTGAGCCAAAAGATGGAGCAGAACGAACCGG 5925 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| || || || |||| || ||||||| | || |||||||||| ||| | Sbjct 5926 AGAAGAAGATGCCTTCCACGGCGGCGAACGCGACGATGCGCTCGGCGTACGCGGCGCGCT 5985 Query 17136 TGTTA-CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCT 17194 |||| || | ||| || || |||| | ||| || || | | ||| || ||||| Sbjct 5986 TGTTGTCGCA-CCACTTGAGCGCCCAGTTGGCCTTGCGCATGACGCACGGAATGGTTTCG 6044 Query 17195 ATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 ||||| | | || || || |||| | || || || |||||||| || Sbjct 6045 ATGGCGCGCAGCACGCGGTCCTTCTCGGTCGGGTCCTTGATGTATGTGTCGATGAGGAGC 6104 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||||| ||| ||||| ||||| || ||||| || || || || ||||||||||| || Sbjct 6105 GAGTACACTTCCGAGTGGATGTTTTCGATGGCGATTTGGAACCCATAAAAGCATCGCGCC 6164 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTC--CGCTAGATTTTCGTTCACGATGCCGT 17372 || | | ||| ||||| | || |||| || || |||||||| |||||||||| Sbjct 6165 TCGGGGACTTGCACTTCATTGCTAAA--GTTCATGGCCAGGTTTTCGTTGACGATGCCGT 6222 Query 17373 CGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAA 17409 ||||||| || || ||||||| | ||| | ||||| Sbjct 6223 CGCTCGCAGCAAAGAACGCCAGCACGTGCGTGATGAA 6259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517505354360280