Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2733 114 2e-20 >seq2733 Length=19037 Score = 114 bits (126), Expect = 2e-20 Identities = 214/312 (69%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 145536 TTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTC 145595 ||| || | ||| ||||| ||||| |||||| ||||| || || |||| || || Sbjct 12454 TTACACAGACATGTCCATCTTGATGGTTTTGTGGGGATGGTATCCGTCGAGCGTGAAATC 12395 Query 145596 CTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCT-GAGCCTGGGAAAGG 145654 || | | || ||||| || || | ||| || ||| |||| | || || | Sbjct 12394 GTCAAACGTAAAATCATCGATTTCGGTCTTG-GCCGCATTCACCTTGAGCGTCGGGAACG 12336 Query 145655 GCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCG 145714 |||| || || | ||||| || |||||| |||| ||||| | |||||| |||| Sbjct 12335 GCCGCGGCGACCGCTTGAGCTGCTCCTGGAGGGGCGCCACATGGTTCAAGTAGACATGCG 12276 Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774 |||| || | ||||| |||||||| || | | ||| || | ||||||| | Sbjct 12275 CGTCGCCAAACACGTGAATGAAGTCGCCAGCTTGGAGCCCACACACTTGGGCGAGGAGAC 12216 Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834 ||||||||| | ||||||||| || ||||||||||| || ||||||||||| | || Sbjct 12215 GGGTCAGCAGCGCGTAGCTGGCAATATTGAAGGGCACGCCGAGCCCCATGTCGGCACTGC 12156 Query 145835 GCTGGTACAGCT 145846 |||| |||| || Sbjct 12155 GCTGATACATCT 12144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590030914152840