Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16]
6,221 sequences; 51,796,608 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq3609 95.1 9e-15
seq916 82.4 6e-11
>seq3609
Length=34764
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158
|| || || || | ||| |||| || || || || || || || |||||||||||| |
Sbjct 21584 CCACCACGCAGGCGAAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 21643
Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218
| || || ||||||| ||| || |||||| ||||||| | ||||| ||| |||
Sbjct 21644 AGGGTACGACCGTCTTCCAGTTGCTTCCCCGCAAAGATAAGGCGCTGTTGGTCCGGGGGG 21703
Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278
| ||||||||| || || | |||||||| | | | | ||| |||||||
Sbjct 21704 ATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGACG 21763
Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| | ||| ||| | |||||||| | || || || || ||||||||
Sbjct 21764 TCGAGGGTTATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21810
>seq916
Length=99455
Score = 82.4 bits (90), Expect = 6e-11
Identities = 150/220 (68%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173
|| |||| ||| | || ||||| ||||| |||||||||||| || || | ||||
Sbjct 60855 AGCACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCT 60914
Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233
|||||||| ||||| ||| |||| | | || || || || | ||||||||| ||
Sbjct 60915 TCCAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCT 60974
Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293
|| | ||||||||| | ||| | ||| || || || | |||||| |
Sbjct 60975 TGGATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCACGTCCAACGTGATGGTC 61034
Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAAC 18333
|| || ||||| || || || ||||| ||||| ||| |||
Sbjct 61035 TTCCCAGTCAAAGTCTTGACGAAAATCTGCATATTTCAAC 61074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379315238730645
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |