Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq2971 280 1e-70 seq1997 206 2e-48 seq916 131 1e-25 seq3609 125 6e-24 seq5958 120 3e-22 seq2657 114 1e-20 >seq2971 Length=8032 Score = 280 bits (310), Expect = 1e-70 Identities = 655/984 (67%), Gaps = 20/984 (2%) Strand=Plus/Minus Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 || ||||| | | ||||||||| ||| |||||||| || ||||| |||| ||||| Sbjct 4238 AATTCGCCCGCGAGGACGCGGCGGCTGTACATGTTGGACGTAAACGGCTCGATTGATTCG 4179 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||||| || || ||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 4178 TTGTTGCCGAGGATCTGCGCGGTGGACGCCGTGGGCATGGGGGCCAAGAGCAGCGAGTTG 4119 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGC 22645 | | |||||||| | | || ||||||| || ||| ||||||||||| |||||| Sbjct 4118 CGGATGCCGTGCTGGGCCACTTGCGCCTTGAGCGACGCCCAATCCCACAGATCCGACGGC 4059 Query 22646 GTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGTAC 22705 || || | |||||| ||||| || ||| ||| ||||| | ||| ||| ||||| Sbjct 4058 GTGAC---GCCCCACAAGTCGTACTGGAACTTGCCCTGACTCACGGGGGAGCCCTCGTAG 4002 Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATAT 22765 || |||||||| || | || ||| ||||| | || |||| ||| ||| || Sbjct 4001 GTCTCGTACGGCCCTTGGCTCTTGGCGAGTTCCATGGACGTTTCCATGGCGGCGTGGTAG 3942 Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825 || || || ||||| | || ||||| | ||| | || ||| ||| | | Sbjct 3941 ATGGTTTCAAAGATCTGCTGGTTCAGCACCTTGGCTTCCACCGACTCGAACGAGTACCCC 3882 Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885 || | | ||||||||| || | || || ||||| || |||||||| |||| || Sbjct 3881 ATGAGGATGAACGCGTCGGCAAGGCCTTGGACGCCAATCCCGATCGGGCGGTGGCGCATG 3822 Query 22886 TTCGACACTTTTGCC----TCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAA 22941 || || |||| || | | || || | || ||||| |||| | Sbjct 3821 TTG----CTGTTGCGCGCTTCTTGGATGGGGTAATAGTTGACGTCGATCACCTTGTTGAG 3766 Query 22942 GTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGATTG 23001 ||| | || || | || | || ||||||| | ||| | || Sbjct 3765 GTTGGTCGTGACCACCTTGGCGATCTTGTGCAGGTGTGCAAAGTCAAACACGGCG--TTC 3708 Query 23002 TACAACAAACTTGTTGACGGCG--ATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTG 23059 | | |||||||| |||| ||| || || || | ||||| |||||||| ||||| ||| Sbjct 3707 T-CGACAAACTT--TGACAGCGCGATGGACGCCAAGTTGCACACGGCCACTTCGTCCTTG 3651 Query 23060 GACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTC 23119 ||||||||| | || ||| || | ||| |||| |||||||||| || | Sbjct 3650 CTCGTGTACTCGATGATCTCGCAGCACAAGTTGGACGACTTGATCGTGCCCAGGTTCTGC 3591 Query 23120 TGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACC 23179 |||||| || | ||||||| ||||||||| ||||||||||||||||| || ||||| Sbjct 3590 TGGTTGGACTTGCCGTTGCACGCATCCTTGTACAGCATGTACGGCGTGCCGGTTTCGACT 3531 Query 23180 TGCGACTCGATGATCGCTCGCCACATAGTCTGAG-CGTGAACACGTCGCACGTACCTGCC 23238 |||||||| | ||| || ||||| ||| | | ||| | | || || | | ||| Sbjct 3530 TGCGACTCCAAGATGGCGAACCACAACTGCTGCGCCTTGATCGTCTTGCGCGCA-CGGCC 3472 Query 23239 TTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC 23298 ||| ||||||||| ||| ||| ||| || || ||||| || | || ||| ||| || Sbjct 3471 TTCCGACTCGTACTTGTGGAACAGCGCCTCGAACTCGGCGCCCCAGCATTCGTGCAGCCC 3412 Query 23299 GGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAA 23358 |||| || | ||||| | | ||||| || || ||||| |||| || Sbjct 3411 CGGCGCTTCATTGGGACAGAACAAGCTCCAGTCGCCGTTCGACTCGACGCGCTTCATGAA 3352 Query 23359 AAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGT 23418 |||||||| ||||| | |||||||||| |||||||| || | || |||||| Sbjct 3351 CAGATCCGGAATCCACATGGCGTAGAACAAGTCGCGGGCACGATGCAGTTCATTGCCGTG 3292 Query 23419 GTTCTTTTTCAAATCCAAAAAGTC 23442 |||||| || | |||||| || || Sbjct 3291 GTTCTTCTTGAGATCCAAGAATTC 3268 >seq1997 Length=17169 Score = 206 bits (228), Expect = 2e-48 Identities = 487/723 (67%), Gaps = 32/723 (4%) Strand=Plus/Minus Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| ||||||| || || || ||| || || || ||||| || ||| | | | Sbjct 6250 CACGTGCTGGCGTTCTTTGCTGCGAGCGACGGCATCGTCAACGAAAACCTGGCCATGA-A 6192 Query 57747 TTTTCACAA-GAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCAT 57805 ||| ||| ||||||||||| | |||||| |||||||||| || || ||| | ||||| Sbjct 6191 CTTTAGCAATGAAGTGCAAGTCCCCGAGGCGCGATGCTTTTATGGGTTCCAAATCGCCAT 6132 Query 57806 TGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGA 57865 |||||| | || || ||| |||| ||||| |||||||| || ||| | |||||| ||| Sbjct 6131 CGAAAACATCCACTCGGAAGTGTACTCGCTCCTCATCGACACATACATCAAGGAC-CCGA 6073 Query 57866 -CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGG 57921 |||||| | || | ||| |||||||| || | || || || | |||| Sbjct 6072 CCGAGAAGGACCGCGTGCTGCGCGCCATCGAAACCATTC---CGTGCGTCATGCGCAAGG 6016 Query 57922 CAGAGTGGTCAATCAAATG----GATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTA 57977 | | ||| | |||| || || || |||||| ||| ||| ||||||| | | Sbjct 6015 CCAACTGGGCGCTCAAGTGGTGCGACAACAAGCGC----GCCGCGTACGCCGAGCGCATC 5960 Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTT-TTCGGGCAGCTTTGCGGCAATATTTTG 58036 |||||||||||||||| ||||| || ||||| | ||| | | ||| | || ||||| Sbjct 5959 GTCGCGTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGTTCGTTCTGC-TCCATCTTTTG 5901 Query 58037 GATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGA 58096 | | ||||| ||||| || ||||| |||||| |||| ||||| | || |||||||| Sbjct 5900 GCTCAAGAAGCGCGGGCTCATGCCGGGCCTGTCGTTCTCGAACGAACTCATCTCGCGCGA 5841 Query 58097 CGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGAC 58156 ||| || || || || ||||| ||| | |||||||| | | ||||| || | | | Sbjct 5840 CGAAGGCCTGCACTGCGACTTTGCATGCTTGATGTACTCGAAGCTCGTCAACAAGCTGTC 5781 Query 58157 GCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | |||||| || ||| || ||| || || | |||||| || ||||||| | Sbjct 5780 GGACACGCGCATCCACGAGATTGTCGGCGATGCCGTTGAGATCGAGAAGCAGTTTGTGAG 5721 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| | | || |||| | | || |||||| | | |||| | |||||||| Sbjct 5720 CGAGAGCTTGCCCGTGGAACTCATTGGCATGAACTCGGCGCTCATGTGCGAATACATTGA 5661 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAG------AGCGTCATTACAACAC 58330 ||| ||||| | | | |||||| | |||| | ||| || || | | Sbjct 5660 GTTCTGCGCCGATCGCC---TCCTCGAATCGCTTGGCGCCCCCAAGC-TCTTTGC--GGC 5607 Query 58331 GAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGA 58390 || || || ||||| | ||| | ||||||| | | ||||| || ||||||||||| Sbjct 5606 CAAGAACCCCTTTGACTGGATGGACATGATCTCATTGCAAGGCAAAACCAACTTTTTCGA 5547 Query 58391 AAA 58393 || Sbjct 5546 GAA 5544 >seq916 Length=99455 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| |||||||| |||||| |||| || || || ||||| | ||||| ||||| Sbjct 61070 AAATATGCAGATTTTCGTCAAGACTTTGACTGGGAAGACCATCACGTTGGACGTGGAACC 61011 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 ||||||| | || | ||||| || | || |||||||||||| | ||||| || Sbjct 61010 GTCCGACTCGATTGACAACGTCAAGCAAAAGATCCAAGACAAGGAAGGCATCCCGCCTGA 60951 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||||||| | || || || ||||| || |||||||| || ||||||| || Sbjct 60950 CCAGCAGCGCTTGATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACCTTGAGCGACTA 60891 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| |||||||| | || |||| || | ||| | || ||| Sbjct 60890 CAACATCCAAAAGGAATCGACGTTGCACTTGGTGCTCCGCCTGCGCGGTGGT 60839 >seq3609 Length=34764 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || || ||| ||||||| || || || Sbjct 21810 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATAACCCTCGACGTCGAGCCCTCG 21751 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | ||||| |||| || ||||||||||||| | || || ||||| Sbjct 21750 GACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAA 21691 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || || || || || || |||||||| | || ||||||| || ||| Sbjct 21690 CAGCGCCTTATCTTTGCGGGGAAGCAACTGGAAGACGGTCGTACCCTGAGCGACTACAAC 21631 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || || || || || ||| |||| ||| | ||| | || || Sbjct 21630 ATCCAGAAGGAGTCTACCCTGCATTTGGTGCTTCGCCTGCGTGGTGG 21584 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || || ||| ||||||| || || || Sbjct 21582 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATAACCCTCGACGTCGAGCCCTCG 21523 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 ||| |||| | ||||| || | || |||||||||||| | || || || ||| Sbjct 21522 GACTCGATCGACAACGTCAAGCAAAAGATCCAGGACAAGGAAGGAATCCCTCCTGATCAG 21463 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || || || || || || || || || |||||||| | || |||||||||| ||| Sbjct 21462 CAACGCCTCATCTTTGCGGGAAAGCAACTGGAAGACGGTCGCACCCTGAGCGATTACAAC 21403 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTAG 31422 || || || || ||||| || ||| |||| | | || | |||||||| Sbjct 21402 ATCCAGAAGGAGTCGACCCTGCATTTGGTGTTGCGCCTCCGTGGCGGTAG 21353 >seq5958 Length=27980 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| |||| || || || ||||| ||||||| ||||| || Sbjct 18497 CATGCAAATCTTCGTGAAGACGTTGACGGGAAAGACCATCACGCTCGACGTGGAACCTTC 18556 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || || | || |||||||||||| | || || ||||| Sbjct 18557 CGACTCGATTGACAACGTGAAGCAAAAGATTCAAGACAAGGAAGGCATTCCCCCTGACCA 18616 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || || |||||||| |||||||||||| || | ||||| || || Sbjct 18617 GCAGCGTTTGATCTTTGCTGGCAAGCAGTTGGAAGACGGCCGCACGCTCAGCGACTACAA 18676 Query 31372 CATTCAAAAAGAATCGACTCTTCA 31395 ||| ||||| || || || || || Sbjct 18677 CATCCAAAAGGAGTCCACCCTCCA 18700 >seq2657 Length=89683 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| |||| || ||||| ||||| | || || ||||| || Sbjct 86348 CATGCAAATCTTCGTCAAGACGTTGACGGGGAAAACCATCACGTTGGATGTGGAACCATC 86289 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | || || || | || |||||||||||| | || || ||||| Sbjct 86288 CGACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGGATTCCCCCGGACCA 86229 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| || || || || || ||||| || ||||||||| || |||| || || || Sbjct 86228 GCAACGCCTCATCTTTGCCGGCAAGCAATTGGAAGACGGCCGCACGTTGAGTGACTACAA 86169 Query 31372 CATTCAAAAAGAATCGAC 31389 ||| ||||| |||||||| Sbjct 86168 CATCCAAAAGGAATCGAC 86151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445731736090320