Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq916 91.5 1e-13 >seq916 Length=99455 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || ||||| | | |||||| || | || |||||||| | ||||| ||| | Sbjct 60840 CCACCGCGCAGGCGGAGCACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTC 60899 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || | || |||||||| ||||||||||| ||||| ||||| || || | ||| Sbjct 60900 AAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCGGG 60959 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| | ||||| || ||| | |||| | || ||| Sbjct 60960 ATGCCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCACG 61019 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 || | ||| || || || || || | ||| || || ||||| ||||| || Sbjct 61020 TCCAACGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAAATCTGCATATT 61069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381340685152818