Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq916 104 2e-17 seq2657 89.7 4e-13 seq3609 82.4 6e-11 >seq916 Length=99455 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 |||||| || | || ||||| ||||| |||||||| |||| || || |||||| Sbjct 60857 CACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTCAAGGTGCGGCCATCTTC 60916 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC-GACGGGCACGCCTTCTTTGTCGG 20117 |||||| ||||| ||| | || | | ||| || || | |||| | |||||| ||||| Sbjct 60917 CAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCGGG-ATGCCTTCCTTGTCTT 60975 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 || ||||| || || | | ||| || ||| |||||| |||| || ||||| | Sbjct 60976 GGATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCACGTCCAACGTGATGGTCT 61035 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAAC 20216 | || ||||| || ||||| ||||| ||||| ||| ||| Sbjct 61036 TCCCAGTCAAAGTCTTGACGAAAATCTGCATATTTCAAC 61074 >seq2657 Length=89683 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20012 GTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCC 20071 || ||||| ||||| |||||||| || | || || ||||||||||| ||||| Sbjct 86151 GTCGATTCCTTTTGGATGTTGTAGTCACTCAACGTGCGGCCGTCTTCCAATTGCTTGCCG 86210 Query 20072 GCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 20131 ||| | || || | || || || ||| | ||||| ||||| || ||||| ||| Sbjct 86211 GCAAAGATGAGGCGTTGCTGGTCCGGGGGAATCCCTTCCTTGTCCTGGATCTTTTGCTTC 86270 Query 20132 ACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTT 20191 || | | | | || ||| |||||| |||| || |||||||| || |||||||| Sbjct 86271 ACGTTGTCGATCGAGTCGGATGGTTCCACATCCAACGTGATGGTTTTCCCCGTCAACGTC 86330 Query 20192 TTGACAAAAATTTGCAT 20208 ||||| || |||||||| Sbjct 86331 TTGACGAAGATTTGCAT 86347 >seq3609 Length=34764 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 |||||||||||| || || || || || || ||||||||||||| || || | || Sbjct 21370 CAACACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTC 21429 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| ||| || |||||| | || || | || ||||| || | ||||| ||||| Sbjct 21430 TTCCAGTTGCTTTCCCGCAAAGATGAGGCGTTGCTGATCAGGAGGGATTCCTTCCTTGTC 21489 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 || ||||| || || | | | | || || || || || | ||| ||||| Sbjct 21490 CTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGACGTCGAGGGTTATGGT 21549 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||||||| | || ||||| || |||||||| Sbjct 21550 CTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419555387554101