Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3609 95.1 3e-14 >seq3609 Length=34764 Score = 95.1 bits (104), Expect = 3e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || || || || | ||||||||| ||||| ||||| Sbjct 21386 GTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCTTCCAGTTGCTTTCCC 21445 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | || ||||||||||| |||||||| || ||||| |||||| || Sbjct 21446 GCAAAGATGAGGCGTTGCTGATCAGGAGGGATTCCTTCCTTGTCCTGGATCTTTTGCTTG 21505 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | | || || || || || || || || ||||| || || || || Sbjct 21506 ACGTTGTCGATCGAGTCCGAGGGCTCGACGTCGAGGGTTATGGTCTTGCCGGTGAGGGTC 21565 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 21566 TTGACGAAGATTTGCAT 21582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151306625991468