Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2971 203 8e-47 >seq2971 Length=8032 Score = 203 bits (224), Expect = 8e-47 Identities = 251/342 (73%), Gaps = 1/342 (0%) Strand=Plus/Plus Query 363543 TGTA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGT 363601 |||| ||||| ||||| || || || ||| ||| || || || | | ||| || ||| Sbjct 2866 TGTACTTCACCCACGCGACCCCGACCTTGTTCAACGCCGGCACGCCTCGTCCTCAACTGT 2925 Query 363602 CTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTA 363661 | || ||||| || | |||||||||||||||||||| ||||||| |||||| | | Sbjct 2926 CGTCGTGCTTCCTCTTGTCCATGAAGGACGATTCCATCGAAGGTATCTACGACACATTGA 2985 Query 363662 AGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTC 363721 |||| ||||| ||||||||| || ||||| ||||| || |||||||| | | Sbjct 2986 AGAACTGTGCGTGCATTTCCAAGTGGGCTGGCGGCATTGGCGTGAACATCCACAACATCC 3045 Query 363722 GTGCACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGC 363781 | || ||||| ||||||||||| || || | ||| || ||| | ||||||||| Sbjct 3046 GCGCCACCAACAGCTACATTCGCGGGACCAACGGGTCCTCCAACGGGATCATTCCCATGC 3105 Query 363782 TTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGG 363841 |||| ||||| || | ||||| | ||||| |||||||| || ||||||||||| ||| Sbjct 3106 TTCGGGTGTTCAACGACACTGCTCGCTACGTGGACCAGGGCGGGGGAAAGCGCAAGGGGT 3165 Query 363842 CGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTG 363883 |||| || ||||| | |||||| |||||||| || |||| Sbjct 3166 CGTTCGCCATGTACTTGGAGCCTTGGCATGCCGACATCTTTG 3207 Score = 167 bits (184), Expect = 6e-36 Identities = 537/825 (65%), Gaps = 20/825 (2%) Strand=Plus/Plus Query 364072 AAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCC 364131 ||||| || ||||| || || || ||||| || || ||| || | ||||| ||| Sbjct 3457 AAGTACGAGTCGGAAGGCCGTGCGCGCAAGACGATCAAGGCGCAGCAGTTGTGGTTCGCC 3516 Query 364132 ATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191 ||| |||| ||||| | || || || || || || ||| ||||||| ||| |||||||| Sbjct 3517 ATCTTGGAGTCGCAAGTCGAAACCGGCACGCCGTACATGCTGTACAAGGATGCGTGCAAC 3576 Query 364192 CGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATT 364251 ||||||||||||||||| |||| || || || || | |||| | || |||||| Sbjct 3577 GGCAAGTCCAACCAGCAGAACCTGGGCACGATCAAGTCGTCCAACTTGTGCTGCGAGATC 3636 Query 364252 ATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 || || ||||| ||||| ||||| || ||| | ||||| |||||||| | Sbjct 3637 ATCGAGTACACGAGCAAGGACGAAGTGGCCGTGTGCAACTTGGCGTCCATCGCGCTGTCA 3696 Query 364312 GCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCT 364371 |||||| | | | |||||| || || | | | || | | Sbjct 3697 AAGTTTGTCGAGAACGCCGTGTTTGACTTTGCACACCTGCACAAGATCGCCAAGGTGGTC 3756 Query 364372 ACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG---- 364426 || ||| ||| ||||||| |||||| || ||||| || || | ||||| || Sbjct 3757 ACGACCAACCTCAACAAGGTGATCGACGTCAACTATTACCCCATCCAAGAAGCGCGCAAC 3816 Query 364427 AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTT 364486 ||| || ||||| || |||||||| || |||| || || ||||| || |||| | Sbjct 3817 AGC-----AACATGCGCCACCGCCCGATCGGGATTGGCGTCCAAGGCCTTGCCGACGCGT 3871 Query 364487 TTATGATGCTCAAGATG---GCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGA 364543 | || |||| | | | || || ||| || || || || || || ||| Sbjct 3872 ---TCATCCTCATGGGGTACTCGTTCGAGTCGGTGGAAGCCAAGGTGCTGAACCAGCAGA 3928 Query 364544 TCTTTGAAACAATGTATTTTGCCGCAAT-GACTGCTTCGTGTGATTTGGCAAAAACCAAG 364602 |||||||||| || || ||||| || || | | || | | | ||| | ||||| Sbjct 3929 TCTTTGAAACCATCTACCACGCCGCCATGGAAACGTCCATGGAACTCGCCAAGAGCCAAG 3988 Query 364603 GGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTA 364662 || |||| || || ||||| ||||| | ||||| || ||||||| || | Sbjct 3989 GG-CCGTACGAGACCTACGAGGGCTCCCCCGTGAGTCAGGGCAAGTTCCAGTACGACTTG 4047 Query 364663 TGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAA 364721 ||| |||||||| || | | ||| | |||| |||| | | ||| || | Sbjct 4048 TGGGGCGTCACGCCGTCGGATCTGTGGGATTGGGCGTCGCTCAAGGCGCAA-GTGGCCCA 4106 Query 364722 GCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGAT 364781 ||| || | |||||||| || | || |||||||||||||| || || || ||||| Sbjct 4107 GCACGGCATCCGCAACTCGCTGCTCTTGGCCCCCATGCCCACGGCGTCCACCGCGCAGAT 4166 Query 364782 CCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCT 364841 |||||| |||||||| | |||| |||||||| ||| | || ||||| || || Sbjct 4167 CCTCGGCAACAACGAATCAATCGAGCCGTTTACGTCCAACATGTACAGCCGCCGCGTCCT 4226 Query 364842 TTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCT 364886 | || ||||| | | ||||| |||||| | | ||||| || Sbjct 4227 CGCGGGCGAATTCACCATCGTTAACAAGTACTTGATGAAGGAGCT 4271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303249714164822