Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2971 163 3e-35 seq3609 149 6e-31 seq916 134 1e-26 seq1997 118 1e-21 seq5958 104 2e-17 seq2657 96.9 3e-15 >seq2971 Length=8032 Score = 163 bits (180), Expect = 3e-35 Identities = 632/978 (65%), Gaps = 24/978 (2%) Strand=Plus/Minus Query 145033 GATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACG 145092 ||||| || | || ||||||| || |||| || ||||| || | || || || Sbjct 4275 GATCAGCTCCTTCATCAAGTACTTGTTAACGATGGTGAATTCGCCCGCGAGGACGCGGCG 4216 Query 145093 CAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGT 145152 |||| ||| ||||| || || || | || ||||| ||||| ||||| || ||||| Sbjct 4215 GCTGTACATGTTGGACGTAAACGGCTCGATTGATTCGTTGTTGCCGAGGATCTGCGCGGT 4156 Query 145153 CGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTC 145212 | || ||||||||| |||| | | || ||||| | |||||||| | | Sbjct 4155 GGACGCCGTGGGCATGGGGGCCAAGAGCAGCGAGTTGCGGATGCCGTGCTGGGCCACTTG 4096 Query 145213 TTCCTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTG 145272 |||| |||| |||||||||| || | |||| | ||| |||||| ||||||||| Sbjct 4095 CGCCTTGAGCGACGCCCAATCCCACAGATCCGACGGCGTGACGCCCCACAAGTCGTACTG 4036 Query 145273 CAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGG 145331 || |||||| || ||||| ||| | ||| ||| | |||| | | |||| Sbjct 4035 GAACTTGCCCTGACTCACGGGGGAGCCCTCGTAGGTCTCGTA-CGGCCCTTGGCTCTTGG 3977 Query 145332 CGAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGA 145391 |||| || || |||| ||| || || || || || || ||| ||| | Sbjct 3976 CGAGTTCCATGGACGTTTCCATGGCGGCGTGGTAGATGGTTTCAAAGATCTGCTGGTTCA 3917 Query 145392 GCAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCC 145451 ||| | | ||||| | |||| ||| | || || | || || ||||| || | Sbjct 3916 GCACCTTGGCTTCCACCGACTCGAACGAGTACCCCATGAGGATGAACGCGTCGGCAAGGC 3857 Query 145452 CCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAG 145511 | || | || | ||||| || || || ||||||||| | | ||| | ||| | Sbjct 3856 CTTGGACGCCAATCCCGATCGGGCGGTGGCGCATGTTGCTGTTGCGCGCTTCTTGGATGG 3797 Query 145512 GATA-TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGC 145570 | || | | | ||| ||||| | || || | ||| | || ||||| | || | Sbjct 3796 GGTAATAGTTGACG-TCGATCACCTTGTTGAGGTTGGTCGTGACCACCTTGGCGATCTTG 3738 Query 145571 CGCAACTTTTCAAAGTCAAACCGAGCCTCGTCAACGACCAC--ACAGCTATTGACGGCGA 145628 ||| | | ||||||||||| || | || || | | ||||| |||| Sbjct 3737 TGCAGGTGTGCAAAGTCAAACACGGCGTTCTCGACAAACTTTGACAGC--------GCGA 3686 Query 145629 TCGACGCCAAATTACAAACTGCCGTCTCCTCGGCG-TCGCTGTATTGTACGATCTCGGCG 145687 | |||||||| || || || ||| || || | ||| |||| | | ||||||| | Sbjct 3685 TGGACGCCAAGTTGCACACGGCCACTTCGTCCTTGCTCG-TGTACTCGATGATCTCGCAG 3627 Query 145688 CACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCG 145747 ||||| ||| | ||||| || ||||| || ||||| || || | ||||||||| Sbjct 3626 CACAAGTTGGACGACTTGATCGTGCCCAGGTTCTGCTGGTTGGACTTGCCGTTGCACGCA 3567 Query 145748 TCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGT 145805 |||||||| ||||||||||| ||| || || || |||| ||||| ||| ||| Sbjct 3566 TCCTTGTACAGCATGTACGGCGTGCCGGTTTCGACTTGCGACTCCAAGATGGCGAAC--C 3509 Query 145806 GCAAGTCCTGCG-CACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAG 145864 ||| | ||||| | | | | ||| | | ||||| || ||||| || | | Sbjct 3508 ACAACTGCTGCGCCTTGATCGTCTTGCGCGCA-CGGCCTTCCGACTCGTACTTGTGGAAC 3450 Query 145865 AGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTT-GTTGGGACACAT 145923 ||| |||| ||| ||| || |||| ||| ||| || || | ||| |||||||| | Sbjct 3449 AGCGCCTCGAACTCGGCGCCCCAGCATTCGTGCAGCCCCGG-CGCTTCATTGGGACAGAA 3391 Query 145924 CAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGC 145983 || ||| ||||||| | | |||||||| ||| |||| ||| || | ||||| || Sbjct 3390 CAAGCTCCAGTCGCCGTTCGACTCGACGCGCTTCATGAACAGATCCGGAATCCACATGGC 3331 Query 145984 GTACATCAAGTCGCGCGC 146001 ||| | ||||||||| || Sbjct 3330 GTAGAACAAGTCGCGGGC 3313 >seq3609 Length=34764 Score = 149 bits (164), Expect = 6e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 |||| ||| ||||| | |||||||||||| || |||||||||||||||| |||||| | Sbjct 21368 CGCAACACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCG 21427 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || || ||||| || || |||| | || ||||| || |||||||||||||| ||| Sbjct 21428 TCTTCCAGTTGCTTTCCCGCAAAGATGAGGCGTTGCTGATCAGGAGGGATTCCTTCCTTG 21487 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||||| | || | | || | || ||||| ||||| ||| | | Sbjct 21488 TCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGACGTCGAGGGTTATG 21547 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| || || || ||||| || ||||| Sbjct 21548 GTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21582 >seq916 Length=99455 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || ||||| || || | ||||| |||||||| |||||||| |||||| Sbjct 60840 CCACCGCGCAGGCGGAGCACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTC 60899 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||||| || |||| || ||||||||||| || ||| Sbjct 60900 AAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCGGG 60959 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||||| | || | | |||| | || | | Sbjct 60960 ATGCCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCACG 61019 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | ||| || |||||||||||||| Sbjct 61020 TCCAACGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAAATCTGCAT 61066 >seq1997 Length=17169 Score = 118 bits (130), Expect = 1e-21 Identities = 353/528 (67%), Gaps = 35/528 (7%) Strand=Plus/Minus Query 46084 ATGCCGTGCGT---GCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCA---GC 46137 || |||||||| ||||||| || |||||||| | |||||| | ||| || || Sbjct 6037 ATTCCGTGCGTCATGCGCAAGG---CCAACTGGGCGCTCAAGTGGTGCGACAACAAGCGC 5981 Query 46138 ACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCT 46197 ||||| | ||||||||| || || || || || ||||| ||| |||| || || Sbjct 5980 GCCGCG---TACGCCGAGCGCATCGTCGCGTTCGCCGCCGTGGAAGGCATCTTCTTCTCC 5924 Query 46198 GGCA-GTTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGT 46255 || ||| ||| ||||||||| |||| || | |||| ||||||| |||||| ||| Sbjct 5923 GGTTCGTTCTGCT-CCATCTTTTGGCTCAAGAAGCGCGGGC-TCATGCCGGGCCTGTCGT 5866 Query 46256 TTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTG---TCTCT 46312 | ||||| || || ||||||||||| |||||||| |||||||| || | | Sbjct 5865 TCTCGAACGAACTCATCTCGCGCGACGAAGGCCTGCACTGCGACTTTGCATGCTTGATGT 5806 Query 46313 ACTATAACACTCGCGTGCACGACAAGCTTGCGCCCGACAC---CGTGC-TGAGCATGTTC 46368 ||| || |||| | ||||||| | | ||||| | | | ||| || || Sbjct 5805 ACTCGAA-GCTCG-----TCAACAAGCT---GTCGGACACGCGCATCCACGAG-ATTGTC 5756 Query 46369 AAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTA-CGGCCGCACTGCCCGCTGCCCTGCT 46427 || || || | || |||||| ||||| | | || || |||||| | || | Sbjct 5755 GGCGATGCCGTTGAGATCGAGAAGCAGTTTGTGAGCGAGAGC-TTGCCCGTGGAACTCAT 5697 Query 46428 GGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGT 46487 ||||||||| | | |||||||| ||||| ||||| || || || || |||| Sbjct 5696 TGGCATGAACTCGGCGCTCATGTGCGAATACATTGAGTTCTGCGCCGATCGCCTCCTCGA 5637 Query 46488 GCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACAT 46547 |||| | || |||| ||| || || || ||||| | ||| ||| || Sbjct 5636 ATCGCTTGGCGCCCCCAAGCTCTTTGCGGCCAAGAACCCCTTTGACTGGATGGACATGAT 5577 Query 46548 CTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||| || | |||||||| || |||||||| |||||||| |||||||| Sbjct 5576 CTCATTGCAAGGCAAAACCAACTTTTTCGAGAAGCGCGTGGGCGAGTA 5529 >seq5958 Length=27980 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||| ||||||||||| |||||||| ||||| Sbjct 18823 CCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTG 18764 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || | ||||||||| || |||| |||||||||||||| || || Sbjct 18763 AGCGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGGA 18704 Query 131128 AT 131129 || Sbjct 18703 AT 18702 Score = 102 bits (112), Expect = 8e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| ||||||||||| |||||||| ||||| | ||||| ||| || | ||||||||| Sbjct 18695 GGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCCAACTGCTTGCC 18636 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 || |||| |||||||||||||| || || || ||||| ||||| || || ||||| Sbjct 18635 AGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTTTTGCTT 18576 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | | |||| | || | ||||| || | ||| || || || | || Sbjct 18575 CACGTTGTCAATCGAGTCGGAAGGTTCCACGTCGAGCGTGATGGTCTTTCCCGTCAACGT 18516 Query 131217 TTTTACGAAAATCTGCATG 131235 || ||||| || |||||| Sbjct 18515 CTTCACGAAGATTTGCATG 18497 >seq2657 Length=89683 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||| |||||||| |||||||| || ||| Sbjct 86121 CCACCACGCAGGCGGAGCACGAGGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCACTC 86180 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || | |||||||| || |||| | || ||||||||||| || Sbjct 86181 AACGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCCGGGGGA 86240 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | | || | | |||| | || | Sbjct 86241 ATCCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTGTCGATCGAGTCGGATGGTTCCACA 86300 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | |||||| || || | || || ||||| || |||||| Sbjct 86301 TCCAACGTGATGGTTTTCCCCGTCAACGTCTTGACGAAGATTTGCATG 86348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471976095104640