Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq177 84.2 3e-11 >seq177 Length=11201 Score = 84.2 bits (92), Expect = 3e-11 Identities = 128/180 (71%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 126202 GCCGAATCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGC 126261 |||| ||||| || |||| | |||||||||||||||||| ||| ||| || || Sbjct 1000 GCCGCGTCCTTCCCGCCCTGGAGCCGCGTGCCAAACTGACCAGACGGAACCAGCAGTGGC 1059 Query 126262 ACATTGTTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGT-CTCGCACAGGTTCTG 126320 || ||||||| || || ||||||||||| | |||||||| || ||| | || | Sbjct 1060 ACGTTGTTGGAGCCGACGAAGTCCTGCGCCATGTTGACAATCGTGCTC-AATAGCGACGC 1118 Query 126321 CTCGCCGTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGAT 126380 ||||||||| | ||| | || || ||||| ||| ||| ||| || || || || || Sbjct 1119 CTCGCCGTGATGGTACGCCGTGTGTTCGGCGCAGTACCCGGCCAGTTGGGCGACTTTCAT 1178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611344456629600