Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3296 237 3e-57 seq1997 154 3e-32 seq916 152 9e-32 seq3609 149 1e-30 seq2657 149 1e-30 seq5958 145 1e-29 seq5467 114 2e-20 seq2553 98.7 2e-15 seq4078 95.1 2e-14 >seq3296 Length=14028 Score = 237 bits (262), Expect = 3e-57 Identities = 681/1028 (66%), Gaps = 31/1028 (3%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 ||||| |||||||||||||||| |||| ||||| ||| | || || || ||||| ||| Sbjct 5116 CGCCATTGGATGTACTGGTTGGCCGTCAAGTCCAAGTGCTCTTCGATGTGATGGAACGCA 5057 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || |||||||| | ||||||| ||||||||||||| | || ||||| Sbjct 5056 TGCTGCGCCACGTACGCAAAGCGCATGGACGGATGCTTCCACATGGTACCGGTCGTCGGC 4997 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | | ||||| || | | |||||| | || | |||||| || || ||||| || ||| Sbjct 4996 TCCACTTCGCCCGTCAACATCTTGATCATGGTCGACTTGCCGGCGCCGTTGGGCCCGATC 4937 Query 225161 ACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGCCA 225220 ||| |||| || || |||| || | | | || | || || |||| | ||| Sbjct 4936 ACGGCAATGCGCGACGACAGCGCGCAC---GTGATCGTGATGTTGTTGATCG-ACGGC-- 4883 Query 225221 GTTTGGTAAGCAAAGGCCAC-GCCACG--CAGCT--TCATG------ATGGCACGGTCCT 225269 ||||| ||| || | ||| ||| | ||||| |||| | ||| Sbjct 4882 --TTGGTCGTGCCAGGGTACTGGTACGAGCAGTTGTTCATGCGGATGATGGGCTTGCCCT 4825 Query 225270 TGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCT 225329 || | || | ||| ||| || ||||| ||||||| || | | || ||| Sbjct 4824 TGTTCTTGATGTCGGCCAAGAAACCCGGCTCAGGGAACTTGAACGCGAACGTGGCCGCCT 4765 Query 225330 TCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGA 225389 ||||| |||||| | || || || ||| |||| || ||||| ||| || | Sbjct 4764 CCAGGTTGTAGTACGCCTTGGCTTCCGGGCGCAGCTCCACAAAGTGAGACATGTTGCCCA 4705 Query 225390 GGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTCAA 225449 || | || |||||||| ||||||||||||| || | || | |||||| ||| | Sbjct 4704 CGTACGTCTTGAGCTTGCGGTTCTTCTCGTAGTGGATGATGTTGGTGCACACGTTGTCGA 4645 Query 225450 GGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAG-GCCCTTGAGGTGC 225508 |||| || || ||||| ||||||| ||| |||| ||||| || | | | || |||| Sbjct 4644 GGAACCCCGAATCGTGCGACACAACGATCGACGTCACGT-CGCCGGCGTTGTTCAGGTAG 4586 Query 225509 GTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGG 225568 | |||||||||||||||| ||||||| |||||| || ||||||||||| | || Sbjct 4585 TTCTCGAGCCATGCCACGTTGGCCACGTCCAAGTGGTTGGTCGGTTCGTCCAGCAACAAA 4526 Query 225569 ATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGAC 225628 ||||| || | ||||| |||||||| | | |||||||| ||||| ||||| || Sbjct 4525 ATGTCGGCCTTCATGAGCATGGCGCGGGCCAATTCGAGCTTCATCTTCCATCCCCCCGAG 4466 Query 225629 AGGGAGCCGATTGAAACAGAGTGCTTAGCTTC-GTCAAAGCCGTACTCCAGGAGCGTCT- 225686 || || || | | | ||| | | || || || || | | | ||||| | Sbjct 4465 AGCGACCCCACGGCTTGCGCTTGCATCGGGTCGGTGAACCCCACAGACGA-AAGCGTGTC 4407 Query 225687 GGATAATGCGCT-CGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAATCA 225745 || | | | | ||||| ||| || | ||| ||||||||| |||| | || Sbjct 4406 CGACACTTCCTTGCGGGACAGC-ACG-CCCTCAAAGTTGGGGTCCTTGGAGATAAAGTCC 4349 Query 225746 TATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGTCCGGAGC 225805 || | || ||| | | ||| | | || ||| || ||||||||||| || | | Sbjct 4348 AGCACCGACAGGTCGGCTTCCTCCGCTTGCAAGTTGTGCTCGACGTACACCGTGCGCA-C 4290 Query 225806 TGAGAAGCATCG--GGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAGGGTAC 225863 | | | | | ||||| || |||| |||||| || || ||||| || | || || Sbjct 4289 TTCG-TCCTTGGACGGGAACCCTTCCAACTGGCCGTTCGCGATCGCGCGCATGAGCGTCG 4231 Query 225864 TCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTTGAGGC 225923 |||||| ||||||||||| || | ||||| | | || ||||| | || | Sbjct 4230 ACTTGCCGGCGCCGTTGGGGCCACACAACCCGTACCGGTGGCCCTTCTTGAGCTGCAGAC 4171 Query 225924 GCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCACAGGT 225983 ||| | ||| || |||||| ||||||| || || || ||||||||||| ||||||| || Sbjct 4170 GCGCGTTGTTGAGCAGGATCATGCCACCGTACGCGAGCGAGAACTCGCAGTCGCACAAGT 4111 Query 225984 CCTCACCC 225991 | |||||| Sbjct 4110 CTTCACCC 4103 >seq1997 Length=17169 Score = 154 bits (170), Expect = 3e-32 Identities = 319/466 (68%), Gaps = 14/466 (3%) Strand=Plus/Plus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 ||||||| ||| |||||| || || |||||| ||||||| ||||| | | Sbjct 5514 ACGCCCGACTTGGAGTACTCGCCCACGCGCTTCTCGAAAAAGTTGGTTTTGCCTTGCAAT 5573 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || || | ||||| ||||||||||||||| ||| |||| |||||||| || || Sbjct 5574 GAGATCATGTCCATCCAGTCAAAGGGGTTCTTGGCCGCAAAGAGCTTGGGGGCGCCAAGC 5633 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 | | || | ||| || || |||||| ||||| | || ||| || ||||||||||| Sbjct 5634 GATTCGAGGAGGCGATCGGCGCAGAACTCAATGTATTCGCACATGAGCGCCGAGTTCATG 5693 Query 10119 CCAATCATGCGGCAGGGGATGGCG-TCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTC 10177 ||||| | | || ||| || |||| | || | ||| ||| | | || || || Sbjct 5694 CCAATGA-GTTCCACGGGCAAGCTCTCGCTCACAAACTGCTTCTCGATCTCAACGGCATC 5752 Query 10178 CTCGACGATGCTCTT---TAC-CACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 |||| || ||| | | | | ||| ||||||||||| |||||||||| |||| Sbjct 5753 GCCGACAAT-CTCGTGGATGCGCGTGTCC---GACAGCTTGTTGACGAGCTTCGAGTACA 5808 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 | | |||| | ||| ||||| |||||||| ||||| ||||| || || Sbjct 5809 TCAAGCATGCAAAGTCGCAGTGCAGGCCTTCGTCGCGCGAGATGAGTTCGTTCGAGAACG 5868 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 ||| || ||||||||||| || || ||||| || |||| ||||||||| ||||||| Sbjct 5869 ACAGGCCCGGCATGAGCCCGCGCTTCTTGAGCCAAAAGATGGAGCAGAACGAACCGGAGA 5928 Query 10354 ACAGAAGA--CCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCG 10397 |||||| || |||||| | | ||||||| |||||| ||| Sbjct 5929 --AGAAGATGCCTTCCACGGCGGCGAACGCGACGATGCGCTCGGCG 5972 >seq916 Length=99455 Score = 152 bits (168), Expect = 9e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | |||||||| | ||| || || ||||||||||| || ||| Sbjct 60840 CCACCGCGCAGGCGGAGCACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTC 60899 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| || ||||| ||||| || || | | || ||||| || || Sbjct 60900 AAGGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCGGG 60959 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| |||||| ||||||| || || | ||| | | ||| || Sbjct 60960 ATGCCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCACG 61019 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || || | ||||||||||| |||||||| Sbjct 61020 TCCAACGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAAATCTGCAT 61066 >seq3609 Length=34764 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || |||||||| ||||| || || || ||||| || |||||||| |||||| Sbjct 21356 CCGCCACGGAGGCGCAACACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAATCGCTC 21415 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| || || || ||||| | ||| || || || || Sbjct 21416 AGGGTGCGACCGTCTTCCAGTTGCTTTCCCGCAAAGATGAGGCGTTGCTGATCAGGAGGG 21475 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || |||||| ||||||| ||||| | ||| | | || || Sbjct 21476 ATTCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGACG 21535 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || || ||||||||||||||||| || ||||| Sbjct 21536 TCGAGGGTTATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21582 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | ||||| || || || ||||| || |||||||| || ||| Sbjct 21584 CCACCACGCAGGCGAAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 21643 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||||| || || || || | |||||||| || || Sbjct 21644 AGGGTACGACCGTCTTCCAGTTGCTTCCCCGCAAAGATAAGGCGCTGTTGGTCCGGGGGG 21703 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| ||||||| ||||| | ||| | | || || Sbjct 21704 ATGCCTTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGACG 21763 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || || ||||||||||||||||| || ||||| Sbjct 21764 TCGAGGGTTATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21810 >seq2657 Length=89683 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| | ||| || || ||||||||||| || || Sbjct 86121 CCACCACGCAGGCGGAGCACGAGGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCACTC 86180 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | || ||||| || ||||| ||||| || ||||| | ||| ||||| || ||| Sbjct 86181 AACGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCCGGGGGA 86240 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || |||||| ||| ||| ||||| | ||| | || ||| || Sbjct 86241 ATCCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTGTCGATCGAGTCGGATGGTTCCACA 86300 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||||||||| ||||| | ||||||||||| || ||||| Sbjct 86301 TCCAACGTGATGGTTTTCCCCGTCAACGTCTTGACGAAGATTTGCAT 86347 >seq5958 Length=27980 Score = 145 bits (160), Expect = 1e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || |||||||| ||||||||||| || ||| ||| || | || ||||| ||||| Sbjct 18701 GTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCCAACTG 18642 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || || || || | | || ||||| || |||||||||||||||||||||||||| Sbjct 18641 CTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTT 18582 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 | ||| ||| || || | ||| | | ||| || || | |||||||| |||||||| Sbjct 18581 TTGCTTCACGTTGTCAATCGAGTCGGAAGGTTCCACGTCGAGCGTGATGGTCTTTCCCGT 18522 Query 68438 GAGGGTCTTGACGAATATCTGCATTATGCT 68467 | ||||| ||||| || ||||| |||| Sbjct 18521 CAACGTCTTCACGAAGATTTGCATGGTGCT 18492 >seq5467 Length=12210 Score = 114 bits (126), Expect = 2e-20 Identities = 143/191 (75%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGA-ACATGCCATATGCCTCACGGTA 268461 || || ||||||||||| | |||||||||| |||| | ||||||| || || || || || Sbjct 6058 GGACTTTCGTGGTTGAACAAGATGCCGTTG-ACGCAATACATGCCGTACGCTTCTCGATA 6000 Query 268462 GTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAA 268521 || || ||||||||| | || || ||| || || |||| || || || || || || Sbjct 5999 ATTGACCACCGTCCAGAACGCGTACTGCTTGGCCACGCCGTATGGCGACCGCGGGTGAAA 5940 Query 268522 GGGCGTCGTGATC-TTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATG 268580 ||||| || || || ||||| | |||||||| ||||| ||||| || ||||| | Sbjct 5939 CGGCGT-GTCTTCGTTCTGAGGCACGCTGCGGACTTTTCCAAACAGCTCCGACGTCGAGG 5881 Query 268581 CTTGGTAGAAC 268591 ||||||||||| Sbjct 5880 CTTGGTAGAAC 5870 >seq2553 Length=19837 Score = 98.7 bits (108), Expect = 2e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 |||||||| |||||||||| | || | |||||| ||| | ||| | ||||| | Sbjct 2174 TACCGCCATTGGATGTACTCGACCGGCGAGCTGTCCAAGTGCTGCTCCACGTGGTGCAGC 2233 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 | |||||||| |||||||||| ||||| |||| |||||||||||| ||| | | || Sbjct 2234 GAGTGCTGGGCCACGTACGCCACGCGCAAGTTGTGATGCTTCCACATCTCGCCGCTA-TC 2292 Query 225098 GGTTGTGCCTCGCCGG-TGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 || | | | | || || | |||||| ||||| | |||||| || || |||| ||| Sbjct 2293 GGGAGAGGTTTCCTGGACCAGCATCTTGATAAGCGTCGACTTGCCGGCGCCGTTGGCGCC 2352 Query 225157 AATCACGCCAATCCGGGA 225174 |||||| | | ||||| Sbjct 2353 GATCACGGCCACGCGGGA 2370 >seq4078 Length=2209 Score = 95.1 bits (104), Expect = 2e-14 Identities = 60/65 (92%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||| |||||||||||| |||||||||| ||||||| ||||||||||||||||||||| Sbjct 1424 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGACTCTTAATCTTGTGGTCGTGGGTTCGAGC 1365 Query 84516 CCCAC 84520 ||||| Sbjct 1364 CCCAC 1360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921550732338120