Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2733 105 6e-18 >seq2733 Length=19037 Score = 105 bits (116), Expect = 6e-18 Identities = 184/263 (70%), Gaps = 10/263 (4%) Strand=Plus/Minus Query 20325 GATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGG 20384 ||||| ||| || || ||||| ||||| || || || |||||||| |||| |||||| | Sbjct 12051 GATAC--CTGGCAAGAGAGCTCGCCGTCGGCCACGTAGAATTGACAAAACATGTGACACG 11994 Query 20385 GCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATAATGATTCTTCTAT 20444 | ||||||||||| | ||||||||| ||||||||||| ||| |||||| | | | Sbjct 11993 GTGGAAGCGCCATGATGCCCAAGTCCGCAGGGTTCCACGCCGACAGAATGATGCGGCGGT 11934 Query 20445 CGT--GCGGATTATTT--TTTATTAAATCCACAATGTACGACAATTGGTCAAACCCCTGG 20500 ||| | || | || ||| ||||| ||| | | |||||| || || || Sbjct 11933 CGTTGGGGGTGTGCTTGATTTTGTAAAT-GACA---TCTGCCAATTGATCGTGGCCTTGC 11878 Query 20501 CCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCACTGGAAACCG 20560 || || || || | | | ||| | |||| || |||||||| | ||||||||| || Sbjct 11877 CCCGTGTAATCTGTGTGCATGTCGATGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCA 11818 Query 20561 TAAACAGGTCCCAAATCCCCCTC 20583 || || || ||||| || || || Sbjct 11817 TACACTGGACCCAAGTCGCCTTC 11795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441338477747640