Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2971 266 3e-66 >seq2971 Length=8032 Score = 266 bits (294), Expect = 3e-66 Identities = 779/1191 (65%), Gaps = 32/1191 (3%) Strand=Plus/Plus Query 94237 AAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCA 94296 |||||||||||||| || ||| | | ||| | ||| | |||||||| | ||| | || Sbjct 3286 AAGAACCACGGCAATGAACTGCATCGTGCCCGCGACTTGTTCTACGCCATGTGGATTCCG 3345 Query 94297 GACCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356 || || || ||||| ||||||||| ||| || |||||| | || |||||||||||| Sbjct 3346 GATCTGTTCATGAAGCGCGTCGAGTCGAACGGCGACTGGAGCTTGTTCTGTCCCAATGAA 3405 Query 94357 TGTCCCGGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGT-TACGA 94415 || || ||| ||| || || | || || | ||| | | | ||||| Sbjct 3406 GCGCCGGGGCTGCACGAATGCTGGGGCGCCGAGTTCGAGGCGCTGT-TCCACAAGTACGA 3464 Query 94416 ATCGCAGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGA 94475 ||| | ||| || | ||| || | || | || ||||| ||| |||| Sbjct 3465 GTCGGAAGGCCGTGCGCGCAAGACGATCAAGGCGCAGCAGTTGTGGTTCGCCATCTTGGA 3524 Query 94476 CGTACAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTC 94535 || || || || || ||||| ||||| ||| |||||| | ||||| |||||| Sbjct 3525 GTCGCAAGTCGAAACCGGCACGCCGTACATGCTGTACAAGGATGCGTGCAACGGCAAGTC 3584 Query 94536 CAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTA 94595 |||||||||| |||| || ||||||| || || ||||| |||||| ||||||| Sbjct 3585 CAACCAGCAGAACCTGGGCACGATCAAGTCGTCCAACTTGTGCTGCGAGATCATCGAGTA 3644 Query 94596 TACTTCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT 94655 || |||||| | || ||||| ||| ||| |||||| ||||| | || || Sbjct 3645 CACGAGCAAGGACGAAGTGGCCGTGTGCAACTTGGCGTCCATCGCGCTGTCAAAGTTTGT 3704 Query 94656 GCGAGATGCCTACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGG 94715 ||||| | ||| | ||| | | | ||| | || | || Sbjct 3705 -CGAGAACGC----CGTGTTTGACTTTGCAC-ACCTGCACAAGAT-----------CGCC 3747 Query 94716 AAGGATGGTCTTGA---ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGA 94772 |||| ||||| || |||| |||| ||| |||||| |||| |||||| ||| || Sbjct 3748 AAGG-TGGTCACGACCAACCTCAACAAGGTGATCGACGTCAACTATTACCCCATCCAAGA 3806 Query 94773 GGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGA 94832 ||| ||| ||| || || || || ||||| || |||||||| || | || || Sbjct 3807 AGCGCGCAACAGCAACATGCGCCACCGCCCGATCGGGATTGGCGTCCAAGGCCTTGCCGA 3866 Query 94833 CGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAA 94892 |||| | | | ||| | | | ||| || || || || || |||| | | Sbjct 3867 CGCGTTCATCCTCATGGGGTACTCGTTCGAGTCGGTGGAAGCCAAGGTGCTGAACCAGCA 3926 Query 94893 CATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCA-GATCGG 94951 || || |||| ||| || ||| |||||| || ||| | | | |||| || | Sbjct 3927 GATCTTTGAAACCATCTACCACGCCGCCATGGAAACGTCCATGGAACTCGCCAAGAGCCA 3986 Query 94952 ACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCG 95011 | ||||| |||| | | | || || ||| || ||||||| || |||| || Sbjct 3987 A----GGGCCGTACGAGACCTACGAGGGCTCCCCCGTGAGTCAGGGCAAGTTCCAGTACG 4042 Query 95012 ACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAA--GCTCTACGCGCTGATGT 95069 || | ||||| || | ||| |||| ||||| || |||| |||| | |||| | || Sbjct 4043 ACTTGTGGGGCGTCACGCCGTCGGATCTGTGGGATTGGGCGTCGCTCAAGGCGC--AAGT 4100 Query 95070 TATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGC 95129 | | ||||| | ||| ||||||| ||||||||||||||||||| ||||| || Sbjct 4101 GGCCCAGCACGGCATCCGCAACTCGCTGCTCTTGGCCCCCATGCCCACGGCGTCCACCGC 4160 Query 95130 GCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCG 95189 ||||||||| ||||||||||| || |||| || || || |||||| |||||| | | || Sbjct 4161 GCAGATCCTCGGCAACAACGAATCAATCGAGCCGTTTACGTCCAACATGTACAGCCGCCG 4220 Query 95190 GGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCT 95249 || ||||| || |||||| || || | |||||| || | | ||| |||| || || Sbjct 4221 CGTCCTCGCGGGCGAATTCACCATCGTTAACAAGTACTTGATGAAGGAGCTGATCTCGCT 4280 Query 95250 GGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAA 95309 |||| ||||| | | ||| ||||| | | | | | |||| ||| || || Sbjct 4281 GGGTCTGTGGAACAGCGACGTCCGCAACCAGATCTTGCATGACCGCGGCAGCGTTCAAAA 4340 Query 95310 CATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCA 95369 | || || || || | |||| |||||| | |||||||| |||||||||||| ||| Sbjct 4341 CGTCGCGTCCATCCCCGCGGACGTCAAGGAAGTGTACAAGACTGTGTGGGAGATCAAGCA 4400 Query 95370 GCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAG 95420 || | |||||| || |||| |||||| | ||||||||||| || Sbjct 4401 AAAGGTCGTGCTCGACTTGGCCGCCGACCGCGGTGCGTTCATCTGCCAAAG 4451 Score = 167 bits (184), Expect = 2e-36 Identities = 336/496 (68%), Gaps = 2/496 (0%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||| ||||||| ||||||||| |||| ||||||||| | || ||| | || | Sbjct 2706 TACGACTACTTTGGCTTCAAAACGTTGGAAAAGTCGTACTTGCTTCGCGTGGGCGACAAG 2765 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | |||||| || || || || | |||||||| || | || || ||| | ||| Sbjct 2766 GTGTGCGAGCGCCCCCAACACTTGATCATGCGCGTGGCTGTGGGCATCCACAAAGAAGAC 2825 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAG-ACATGCGGGACAAGAGGTATACCATGGCCAC 93896 || | || || | | | ||| ||||| | | | | ||| || || Sbjct 2826 ATTGAGTCGGTGCTGACCACGTAC-GAGTACATGTCGCAATTGTACTTCACCCACGCGAC 2884 Query 93897 CCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGAC 93956 ||||||| |||||||||| || || || || || |||| ||||| ||||| || | Sbjct 2885 CCCGACCTTGTTCAACGCCGGCACGCCTCGTCCTCAACTGTCGTCGTGCTTCCTCTTGTC 2944 Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016 | |||| ||| |||||| || || | ||||| | ||| |||||||| ||| || Sbjct 2945 CATGAAGGACGATTCCATCGAAGGTATCTACGACACATTGAAGAACTGTGCGTGCATTTC 3004 Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076 || | || || || || || | | ||||| || | || |||| |||||| Sbjct 3005 CAAGTGGGCTGGCGGCATTGGCGTGAACATCCACAACATCCGCGCCACCAACAGCTACAT 3064 Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136 ||||| ||||| || |||||||||| || | || ||||| ||||| |||||| || | Sbjct 3065 TCGCGGGACCAACGGGTCCTCCAACGGGATCATTCCCATGCTTCGGGTGTTCAACGACAC 3124 Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196 || ||||||||||||||||| || || | | | ||||| || ||||| | || | || Sbjct 3125 TGCTCGCTACGTGGACCAGGGCGGGGGAAAGCGCAAGGGGTCGTTCGCCATGTACTTGGA 3184 Query 94197 GCCCTGGCACGCGGAC 94212 ||| ||||| || ||| Sbjct 3185 GCCTTGGCATGCCGAC 3200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494684729087160