Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq916 84.2 1e-11 >seq916 Length=99455 Score = 84.2 bits (92), Expect = 1e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCATC 34831 |||||||| | || ||| || || ||||| ||||| | |||| | || |||| || Sbjct 60858 ACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTCAAGG-TGCGGCCATCTTC 60916 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || || || |||||||| || | || |||||||| |||| | || |||||||| Sbjct 60917 CAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTG 60976 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||| || |||||| | ||||| || | || || || | || ||||| || Sbjct 60977 GATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCACGTCCAACGTGATGGTCTT 61036 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || | |||||| || || ||||||||||| Sbjct 61037 CCCAGTCAAAGTCTTGACGAAAATCTGCATATT 61069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324608986787688