Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq3609 86.0 5e-12 seq2657 82.4 6e-11 >seq3609 Length=34764 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| || | || ||||| ||||| ||| |||| ||| | Sbjct 21810 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATAACCCTCGACGTCGAGCCCTCG 21751 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || | ||| | | || || || ||||| || || |||||| | ||| ||| || Sbjct 21750 GACTCGATCGACAACGTCAAGCAGAAGATCCAGGACAAGGAAGGCATCCCCCCGGACCAA 21691 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | ||||| | |||||| || || ||||| |||| || || ||||||||| Sbjct 21690 CAGCGCCTTATCTTTGCGGGGAAGCAACTGGAAGACGGTCGTACCCTGAGCGACTACAAC 21631 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || ||||||||||| |||| ||||| Sbjct 21630 ATCCAGAAGGAGTCTACCCTGCATTTGGTG 21601 >seq2657 Length=89683 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || ||||| || || || || |||||||| || | || ||| | | Sbjct 86347 ATGCAAATCTTCGTCAAGACGTTGACGGGGAAAACCATCACGTTGGATGTGGAACCATCC 86288 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || | ||| | | || || |||||||| || || ||||| | ||| ||| ||| Sbjct 86287 GACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGGATTCCCCCGGACCAG 86228 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | || || | ||| || || || |||| |||| | || || ||||||||| Sbjct 86227 CAACGCCTCATCTTTGCCGGCAAGCAATTGGAAGACGGCCGCACGTTGAGTGACTACAAC 86168 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || |||||||| || ||||||||| | ||| Sbjct 86167 ATCCAAAAGGAATCGACGTTGCACCTCGTG 86138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398846557784269