Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq3609 127 2e-24 >seq3609 Length=34764 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 ||||| || ||||| | || || || || || |||||||||||||||| |||| | Sbjct 21368 CGCAACACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCG 21427 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| ||||| || || ||| |||| || ||||||||||| ||||| || ||||| ||| Sbjct 21428 TCTTCCAGTTGCTTTCCCGCAAAGATGAGGCGTTGCTGATCAGGAGGGATTCCTTCCTTG 21487 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || ||||| || | | || | || ||| | ||| || || || | || | Sbjct 21488 TCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGACGTCGAGGGTTATG 21547 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||||||||| | || || ||||| |||||||| Sbjct 21548 GTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21582 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || ||||| | ||||| || || || |||||||| ||||||| || | |||||| Sbjct 21602 ACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTACGACCGTCTTCC 21661 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 ||||| || || ||| |||| || || || || || || || |||||||| ||||| Sbjct 21662 AGTTGCTTCCCCGCAAAGATAAGGCGCTGTTGGTCCGGGGGGATGCCTTCCTTGTCCTGG 21721 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 || || || || | | || | || ||| | ||| || || || | || | |||||| Sbjct 21722 ATCTTCTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGACGTCGAGGGTTATGGTCTTG 21781 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCAT 137411 ||||| | || || ||||| |||||||| Sbjct 21782 CCGGTGAGGGTCTTGACGAAGATTTGCAT 21810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488506009597200