Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2657 104 6e-17 seq5958 89.7 1e-12 seq916 89.7 1e-12 >seq2657 Length=89683 Score = 104 bits (114), Expect = 6e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| ||| | || || ||||| ||||| ||||| |||||| || ||| | |||| Sbjct 86333 CAAGACGTTGACGGGGAAAACCATCACGTTGGATGTGGAACCATCCGACTCGATCGACAA 86274 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||||| || || || ||||| ||| |||||| ||| | || ||||| Sbjct 86273 CGTGAAGCAAAAGATCCAGGACAAGGAAGGGATTCCCCCGGACCAGCAACGCCTCATCTT 86214 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| ||||| |||||||| || | || ||| || |||||| |||| || || || Sbjct 86213 TGCCGGCAAGCAATTGGAAGACGGCCGCACGTTGAGTGACTACAACATCCAAAAGGAATC 86154 Query 206364 TACTCTTCACCTTGT 206378 || | ||||| || Sbjct 86153 GACGTTGCACCTCGT 86139 >seq5958 Length=27980 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || ||||| || ||||| | || |||||| ||| ||| | | || Sbjct 18513 AAGACGTTGACGGGAAAGACCATCACGCTCGACGTGGAACCTTCCGACTCGATTGACAAC 18572 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||||||||||||||||| || ||||| ||| || ||| || | | ||||| Sbjct 18573 GTGAAGCAAAAGATTCAAGACAAGGAAGGCATTCCCCCTGACCAGCAGCGTTTGATCTTT 18632 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||||||||||| || | || | ||| |||||| |||| || ||||| Sbjct 18633 GCTGGCAAGCAGTTGGAAGACGGCCGCACGCTCAGCGACTACAACATCCAAAAGGAGTCC 18692 Query 206365 ACTCTTCACCTT 206376 || || ||| || Sbjct 18693 ACCCTCCACATT 18704 >seq916 Length=99455 Score = 89.7 bits (98), Expect = 1e-12 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || | || || || || ||||| ||||| |||||| || ||| Sbjct 61063 CAGATTTTCGTCAAGACTTTGACTGGGAAGACCATCACGTTGGACGTGGAACCGTCCGAC 61004 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | | || || ||||||||||| ||||| || ||||| || ||| ||| || Sbjct 61003 TCGATTGACAACGTCAAGCAAAAGATCCAAGACAAGGAAGGCATCCCGCCTGACCAGCAG 60944 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | ||||| ||||| ||||| ||||||||||| | || ||| ||| |||||| || Sbjct 60943 CGCTTGATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACCTTGAGCGACTACAACATC 60884 Query 206353 CAGAAAGAGTCTAC 206366 || || || || || Sbjct 60883 CAAAAGGAATCGAC 60870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181726601126541