Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2733 118 1e-21 >seq2733 Length=19037 Score = 118 bits (130), Expect = 1e-21 Identities = 180/252 (71%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 147081 CTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAG 147140 |||||| |||||||| |||||||||||||| || || || | ||||| ||||| || || Sbjct 12046 CTGGCAAGAGAGCTCGCCGTCGGCCACGTAGAATTGACAAAACATGTGACACGGTGGAAG 11987 Query 147141 CGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGG 147200 ||||||| | || |||||| |||||||| ||||| | | | || | | | ||| Sbjct 11986 CGCCATGATGCCCAAGTCCGCAGGGTTCCACGCCGACAGAATGATGCGGCGGTCGTTGGG 11927 Query 147201 GTTCCTCTTAATCTCTTCGATAACCCACCT--CAGCTGGTCCACGCCCTGGCCCCCGTAG 147258 | | ||| || | | || | || || || || || ||| || ||| ||| Sbjct 11926 GGTGTGCTTGATTTTGTAAATGA--CATCTGCCAATTGATCGTGGCCTTGCCCCGTGTAA 11869 Query 147259 TTTGTCCCGCA-GTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGG 147317 | ||| ||| ||| | |||| |||| |||||||| | |||||||||||| |||||||| Sbjct 11868 TCTGT-GTGCATGTCGATGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTGG 11810 Query 147318 CCCCAGGTCGCC 147329 |||| |||||| Sbjct 11809 ACCCAAGTCGCC 11798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583442626514400