Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1997 351 1e-90 seq2971 170 3e-36 seq2659 123 4e-22 seq2271 120 4e-21 seq1770 118 2e-20 seq2633 113 6e-19 seq3732 96.9 5e-14 >seq1997 Length=17169 Score = 351 bits (388), Expect = 1e-90 Identities = 446/602 (74%), Gaps = 14/602 (2%) Strand=Plus/Minus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCA-GC 1455773 ||||||| | || ||| ||||| ||||| || || ||||||| |||| | || || Sbjct 6428 CGAGCCGTTCCTTGTCGAGAACCCCAACCGGTTCGTGTTGTTCCCGATCC---AGCATGC 6372 Query 1455774 GGA--TATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 ||| | |||||||||||| | |||| ||||||| ||| ||||| |||||||| ||| Sbjct 6371 GGACGTGTGGGAAATGTACAAGAAAG-CCGAGGCGAGCTTCTGGACTGCCGAGGAACTCG 6313 Query 1455832 ACCTCGGCGC-CGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATC 1455890 || | || || ||| | | ||||| | | || ||| |||||||| |||||| Sbjct 6312 ACTT-GGTGCACGATCAGCGCGACTGGATCAAGTTGTCGGACAACGAGCGCTTCTTCATC 6254 Query 1455891 AAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGG 1455950 | |||||| || || || ||| || || ||||| |||||||| ||| ||||||||| Sbjct 6253 ACGCACGTGCTGGCGTTCTTT-GCTGCGAGCGACGGCATCGTCAACGAAAACCTGGCCAT 6195 Query 1455951 CCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 ||||| || || || ||| | || ||||| || | ||||| |||||||| ||||| Sbjct 6194 GAACTTTAGCAATGAAGTGCAAGTCCCCGAGGCGCGATGCTTTTATGGGTTCCAAATCGC 6135 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 |||||||||||||||||| ||| ||||||||||| |||||||| ||| |||||||||| Sbjct 6134 CATCGAAAACATCCACTCGGAAGTGTACTCGCTCCTCATCGACACATACATCAAGGACCC 6075 Query 1456071 GGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGC 1456130 | ||||||||||| | | | ||||||||||| || | |||| || | | ||||| Sbjct 6074 GACCGAGAAGGACCGCGTGCTGCGCGCCATCGAAACCATTCCGTGCGTCATGCGCAAGGC 6015 Query 1456131 CGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTC 1456190 | |||||||| | |||||| | |||| || || || | |||||||| ||||| Sbjct 6014 CAACTGGGCGCTCAAGTGGTGCGACAACAAGCGCGCCG--CGTACGCCGAGCGCATCGTC 5957 Query 1456191 GGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTC 1456249 | || |||| ||| || |||||||| ||||| || |||||| |||||||||||||| Sbjct 5956 GCGTTCGCCGCCGTGGAAGGCATCTTCTTCTCCGGTTCGTTCTGCTCCATCTTTTGGCTC 5897 Query 1456250 AAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||||||||| |||||||| || || | | | | |||||| | ||| |||||||| Sbjct 5896 AAGAAGCGCGGGCTCATGCCGGGCCTGTCGTTCTCG-AACGAACTCATCTCGCGCGACGA 5838 Query 1456310 AG 1456311 || Sbjct 5837 AG 5836 Score = 188 bits (208), Expect = 1e-41 Identities = 244/327 (75%), Gaps = 14/327 (4%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACG 1456511 ||||||| |||||||| || || | ||| ||| |||||||||||||| |||| | ||| Sbjct 5832 TGCACTGCGACTTTGCATGCTTGATGTACTCGAAGCTCGTCAACAAGCTGTCGGAC-ACG 5774 Query 1456512 TGC--CCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTC 1456569 || ||| | |||| ||| ||| ||||| ||||||||||| ||||||| |||||| Sbjct 5773 CGCATCCACG-AGATTGTCGGCGATGCCGTTGAGATCGAGAAGCAGTTTGTGAGCGAGAG 5715 Query 1456570 GCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTT 1456629 |||| |||| ||||| ||||||||| | ||||||||||| | |||||||| || | Sbjct 5714 CTTGCCCGTGGAACTCATTGGCATGAAC-TCGGCGCTCATGTGCGAATACATTGAGTTCT 5656 Query 1456630 GTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC---AA 1456686 | |||||| ||||| |||| |||| ||| || |||| || ||||| || Sbjct 5655 G-CGCCGATCGCCTCCTCGAATCGCTTGGC-GCCCCCAAGCTCT---TTGCGGCCAAGAA 5601 Query 1456687 CCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCG 1456746 ||| || |||||||| ||||||| | | ||||| ||||||||||||||| || Sbjct 5600 CCCCTTTGACTGGATGGACATGATCTCATTGCAAGGCAAAACCAACTTTTTCGAGAAGCG 5541 Query 1456747 CGT-GGCGAGTACGCCAAGGCCGGCGT 1456772 ||| ||||||||| ||||| | ||||| Sbjct 5540 CGTGGGCGAGTACTCCAAGTCGGGCGT 5514 >seq2971 Length=8032 Score = 170 bits (188), Expect = 3e-36 Identities = 227/313 (73%), Gaps = 2/313 (1%) Strand=Plus/Plus Query 259874 GTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTC 259933 ||||| |||| |||||| ||||||||| || |||||| ||||| || || | Sbjct 2835 GTGCTGACCACGTACGAGTACATGTCGCAATTGTACTTCACCCACGCGACCCCGACCTTG 2894 Query 259934 TTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCC 259993 || || ||||||||||| || || || ||||||||||| || ||| |||||||| | Sbjct 2895 TTCAACGCCGGCACGCCTCGTCCTCAACTGTCGTCGTGCTTCCTCTTGTCCATGAAGGAC 2954 Query 259994 GATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCC 260053 ||||| ||||| || ||||| ||||| | ||| | || ||| ||| |||||| ||| Sbjct 2955 GATTCCATCGAAGGTATCTACGACACATTGAAGAACTGTGCGTGCATTTCCAAGTGGGCT 3014 Query 260054 GGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTAC-GTGGCGGGCAC 260112 |||||||| || | | ||||| | |||||| | | |||| | ||||| || Sbjct 3015 GGCGGCATTGGCGTGAACATCCACAACATCCGCGCCACCAACAGCTACATTCGCGGG-AC 3073 Query 260113 CAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTA 260172 |||||| |||||||| | | ||||||||||| || || |||||||| || ||||| Sbjct 3074 CAACGGGTCCTCCAACGGGATCATTCCCATGCTTCGGGTGTTCAACGACACTGCTCGCTA 3133 Query 260173 CGTCGACCAGTGC 260185 ||| |||||| || Sbjct 3134 CGTGGACCAGGGC 3146 Score = 141 bits (156), Expect = 1e-27 Identities = 340/507 (67%), Gaps = 12/507 (2%) Strand=Plus/Plus Query 262912 CAGCATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAG 262971 ||||| ||| | ||||||||| ||||| |||| | |||||||||||| | || ||||| Sbjct 4105 CAGCACGGCATCCGCAACTCGCTGCTCTTGGCCCCCATGCCCACGGCGTCCACCGCGCAG 4164 Query 262972 ATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTG 263031 ||||| ||||||| ||| | ||||| | ||| |||||| |||| |||||||| Sbjct 4165 ATCCTCGGCAACAACGAATCAATCGAGCCGTTTACGTCCAACATGTACAGCCGCCGCGTC 4224 Query 263032 CTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGC 263091 ||| ||||||| || ||| | || ||| || || | ||| || | ||| || Sbjct 4225 CTCGCGGGCGAATTCACCATCGTTAACAAGTACTTGATGAAGGAGCTGATCTCGCTGGGT 4284 Query 263092 CTGTGGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCAGGGCT-T 263150 ||||||| |||| | ||| ||| | || |||| || || |||| | | Sbjct 4285 CTGTGGAACAGCGACGTCCGCAACCAGATC-TTGCATGAC------CGCGGCAGCGTTCA 4337 Query 263151 TGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGT-GC 263209 ||| || | | || | || |||||| | | |||||| ||||||||| | Sbjct 4338 AAACGTCGCGTCCATCCCCGCGGACGTCAAGGAAGTGTACAAGACTGTGTGGGAGATCAA 4397 Query 263210 CCAACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGT 263269 ||| || | | | || |||| |||||||||| | | || ||| ||||| Sbjct 4398 GCAAAAGGTCGTGC-TCGACTTGGCCGCCGACCGCGGTGCGTTCATCTGCCAAAGCCAAA 4456 Query 263270 CGCTCAACCTGTACCTCGCCGACCCGA-CGGCCGAGAGCATCACGTCGATGCACGCCTAT 263328 | ||| || || |||||||||| | | | | ||| ||||||| |||||| ||| Sbjct 4457 GCATGAACGTGCACATCGCCGACCCAAGCATCAGTAAGC-TCACGTCCATGCACTTTTAT 4515 Query 263329 GCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAAC 263388 |||||| |||||| | ||||| || |||||||| || ||| | || ||| || || Sbjct 4516 GCGTGGAAGCGCGGCTTGAAGACCGGTATGTACTACCTCCGCTCGCGCCCCAAAGCTGAC 4575 Query 263389 GCCATTCAATTCACCGTCGATCAGGCG 263415 || ||||| ||||| || || || ||| Sbjct 4576 GCGATTCAGTTCACGGTGGACCAAGCG 4602 >seq2659 Length=83484 Score = 123 bits (136), Expect = 4e-22 Identities = 175/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 ||||||||| ||| |||||||||||| | ||||| ||||||||| ||||| | | Sbjct 78367 TCGTACTCGACCTACATCTACAAGGTGTTGAAGCAAGTGCACCCCGAAACCGGT-----A 78313 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || ||||| |||||| |||||||||||||| ||||||| || |||| ||||| Sbjct 78312 TC-TCCAAGCGCGGCATGTCCATCATGAACTCGTTCATCAACGATATCTTCGAGCGCATT 78254 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | | || ||||| || |||| ||||||| |||| | | ||||| Sbjct 78253 GCGTCGGAAGCCGGCAAGTTGAGCCGCTACAACAAGAAGTCCACGTTGTCGTCCCGCGAA 78194 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 ||||| |||||||||||||| || | | || ||| |||||| ||| ||||| || || Sbjct 78193 ATCCAAACCGCCGTGCGCCTCATGCTTCCTGGTGAATTGGCCAAGCATGCCGTGTCGGAA 78134 Query 725136 GGCAC 725140 ||||| Sbjct 78133 GGCAC 78129 >seq2271 Length=39178 Score = 120 bits (132), Expect = 4e-21 Identities = 177/248 (71%), Gaps = 12/248 (5%) Strand=Plus/Minus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 |||||||| ||| |||||||||||| | ||||| |||||||| ||||| | | Sbjct 25145 TCGTACTCCACCTACATCTACAAGGTGTTGAAGCAAGTGCACCCTGAAACCGGT-----A 25091 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || ||||| |||||| |||||||||||||| ||||||| || |||| ||||| Sbjct 25090 TC-TCCAAGCGCGGCATGTCCATCATGAACTCGTTCATCAACGATATCTTCGAGCGCATT 25032 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACG---CGC 725072 | | || ||||| || |||| ||||||| || ||| | || ||| Sbjct 25031 GCGTCGGAAGCCGGCAAATTGAGCCGCTACAACAAG---AAGTCGACCTTGTCGTCCCGC 24975 Query 725073 GAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCC 725132 || ||||| |||||||||||||| || | | ||| ||| |||||| ||||||||| || Sbjct 24974 GAAATCCAAACCGCCGTGCGCCTCATGCTTCCCGGTGAATTGGCCAAGCACGCCGTGTCG 24915 Query 725133 GAGGGCAC 725140 || ||||| Sbjct 24914 GAAGGCAC 24907 >seq1770 Length=30746 Score = 118 bits (130), Expect = 2e-20 Identities = 174/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 724896 TCGTACTCGTCCTTTATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCA 724955 |||||||| ||| |||||||||||| | ||||| |||||||| ||| | | | Sbjct 20597 TCGTACTCCACCTACATCTACAAGGTGTTAAAGCAAGTGCACCCTGAAACTGGT-----A 20651 Query 724956 TCCTCCAACAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATC 725015 || ||||| |||||| ||||||||||| || |||||||||| |||| |||||| Sbjct 20652 TC-TCCAAGCGCGGCATGTCCATCATGAACTCCTTCATCAACGACATCTTCGAGCGCATC 20710 Query 725016 GGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAG 725075 | |||| ||||| || |||| ||||||| ||| | | ||||| Sbjct 20711 GCTTCCGAAGCCGGCAAGTTGAGCCGCTACAACAAGAAGTCCACCTTGTCGTCTCGCGAA 20770 Query 725076 ATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAG 725135 ||||| |||||||||||||| || | | |||||| |||||| ||| ||||| || || Sbjct 20771 ATCCAAACCGCCGTGCGCCTCATGCTCCCTGGCGAATTGGCCAAGCATGCCGTGTCGGAA 20830 Query 725136 GGCAC 725140 ||||| Sbjct 20831 GGCAC 20835 >seq2633 Length=50547 Score = 113 bits (124), Expect = 6e-19 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 332856 CGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGACCA 332915 |||| |||||||| | |||||||| || || || ||||| | | |||||||| | Sbjct 36778 CGTCCTTGAGGCGCGTGTACCGCAGGATCGCGCACCGACTCTGGATCGGCTCGATGATCT 36837 Query 332916 TTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGTCG 332975 | | ||| ||||||||||||| || ||||||||||| || || | |||||||||| Sbjct 36838 TGGTCGAGTTGTTGCAGGCCAGCGCGAACCGCGTCGTGCTGCTAAACACTTCCATGGTCC 36897 Query 332976 ACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGATGATGATCT 333035 ||||| || || || ||||| | ||| | ||||||| ||||| ||||| | |||| Sbjct 36898 GACGGAGCGCTTGCTGCGCCGCTGTCGTCATCGAGTCGGCTTCGTCTAGGATCACAATCT 36957 Query 333036 TGTGGCG 333042 | || || Sbjct 36958 TCTGTCG 36964 >seq3732 Length=10824 Score = 96.9 bits (106), Expect = 5e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 1818067 CCATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCA 1818126 ||||| | || |||||||| || || || | ||| | || || | || |||| Sbjct 2382 CCATGTTGAACGGCGTCACACGTTCTGGGACGGTCAAGTTCATGGCAATGCTGCGCGGCA 2323 Query 1818127 CGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGT 1818186 ||||||||| ||| || | | | |||||||| ||||||| | |||||||| ||||| Sbjct 2322 CGCCCACCTGGTCGATCGCTAAGTTGGGGTCGGCCGTGATGACTGTGCGCGCGGAAAAGT 2263 Query 1818187 TGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCC 1818232 ||||||||| |||||| |||||||||||| | || ||||| || Sbjct 2262 CGACGCGCTTCCCCATGAGATTGCCGCGGATACGCCCTTCCTTCCC 2217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177211173115802