Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq2971 87.8 6e-12 >seq2971 Length=8032 Score = 87.8 bits (96), Expect = 6e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 254897 GGCGGCGTGGGACTCAACATCTCCAACGTGCGCGCCAGCGGCACACCGATTCGCTCGACG 254956 |||||| | || | |||||| |||| | ||||||| | || |||||| ||| Sbjct 3015 GGCGGCATTGGCGTGAACATCCACAACATCCGCGCCACCAACAGCTACATTCGCGGGACC 3074 Query 254957 AACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTAC 255016 ||||| | ||| || || || ||| | || ||||||||| || ||||||||| Sbjct 3075 AACGGGTCCTCCAACGGGATCATTCCCATGCTTCGGGTGTTCAACGACACTGCTCGCTAC 3134 Query 255017 GTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCAC 255076 || || || || || || || ||| || ||||| |||| ||| ||||||| ||||| Sbjct 3135 GTGGACCAGGGCGGGGGAAAGCGCAAGGGGTCGTTCGCCATGTACTTGGAGCCTTGGCAT 3194 Query 255077 GCCGACAT 255084 |||||||| Sbjct 3195 GCCGACAT 3202 Score = 87.8 bits (96), Expect = 6e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 256134 AGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCACCGCTCAAA 256193 ||||||| | |||||||||| | ||||| |||||||| || || |||||| || | Sbjct 4106 AGCACGGCATCCGCAACTCGCTGCTCTTGGCCCCCATGCCCACGGCGTCCACCGCGCAGA 4165 Query 256194 TCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGCGCCGCGTTC 256253 |||| || ||| ||| ||||| || | || ||||| | | | |||||||| | Sbjct 4166 TCCTCGGCAACAACGAATCAATCGAGCCGTTTACGTCCAACATGTACAGCCGCCGCGTCC 4225 Query 256254 GCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTACGACTCGGTC 256313 | | ||||| ||| || | || ||| |||||||| || | || || | || |||| Sbjct 4226 TCGCGGGCGAATTCACCATCGTTAACAAGTACTTGATGAAGGAGCTGATCTCGCTGGGTC 4285 Query 256314 TGTGGAAC 256321 |||||||| Sbjct 4286 TGTGGAAC 4293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588209399197345