Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq916 98.7 8e-16 seq2657 89.7 4e-13 >seq916 Length=99455 Score = 98.7 bits (108), Expect = 8e-16 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 111092 GTTTAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGG 111151 ||| ||| ||||| ||||| ||||| || ||||| || || ||||| || |||| || Sbjct 61074 GTTGAAATATGCAGATTTTCGTCAAGACTTTGACTGGGAAGACCATCACGTTGGACGTGG 61015 Query 111152 AACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCG 111211 |||| ||| || ||| | | || || ||||| || ||||| |||||| | |||| Sbjct 61014 AACCGTCCGACTCGATTGACAACGTCAAGCAAAAGATCCAAGACAAGGAAGGCAT-CCCG 60956 Query 111212 TC-GATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCC 111270 | || || || | | || | ||| ||||| |||||||||||| || || | Sbjct 60955 CCTGACCAGCAGCGCTTGATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACCTTGAGC 60896 Query 111271 GATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || ||||| ||||| || | || || ||| | || ||||||||||| Sbjct 60895 GACTACAACATCCAAAAGGAATCGACGTTGCACTTGGTGCTCCGCCTGCGCGGTGG 60840 >seq2657 Length=89683 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| || ||||| |||||||| || |||||||| || |||| |||||| | Sbjct 86347 ATGCAAATCTTCGTCAAGACGTTGACGGGGAAAACCATCACGTTGGATGTGGAACCATCC 86288 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || | | | | || || ||||| || ||||| ||||| ||||| || || Sbjct 86287 GACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGGATTCCCCCGGACCAG 86228 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||| | || || | ||| ||||| ||||||||||| || || || || || Sbjct 86227 CAACGCCTCATCTTTGCCGGCAAGCAATTGGAAGACGGCCGCACGTTGAGTGACTACAAC 86168 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || ||||| ||||| || | || | ||| | || ||||| ||||| Sbjct 86167 ATCCAAAAGGAATCGACGTTGCACCTCGTGCTCCGCCTGCGTGGTGG 86121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421779218933896