Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20astaci_20[genbank_20GCA_5F002197585.1_202017-06-16] 6,221 sequences; 51,796,608 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq916 188 1e-42 seq2657 170 4e-37 seq5958 159 7e-34 seq3609 147 5e-30 seq3296 140 7e-28 seq177 100 6e-16 seq4437 93.3 9e-14 seq946 93.3 9e-14 seq124 89.7 1e-12 seq3869 86.0 1e-11 >seq916 Length=99455 Score = 188 bits (208), Expect = 1e-42 Identities = 185/235 (79%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTC-AG 282930 |||||| |||||||| || |||| || ||||| ||| ||||||||||||||||| Sbjct 60839 ACCACCGCGCAGGCGGAGCACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCT 60898 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||||||||| || | ||| || |||||||||||||| || || |||||| || Sbjct 60899 CAAG-GTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGCG 60957 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || || |||||||||||||||||| || ||| | || || | ||| || | ||| | Sbjct 60958 GGATGCCTTCCTTGTCTTGGATCTTTTGCTTGACGTTGTCAATCGAGTCGGACGGTTCCA 61017 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT-TTTCA 283104 | || | ||||| ||||| || ||||||||||| ||||| |||||||| ||||| Sbjct 61018 CGTCCAACGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAAATCTGCATATTTCA 61072 >seq2657 Length=89683 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || || || || ||||| ||| |||||||||||||||||| Sbjct 86121 CCACCACGCAGGCGGAGCACGAGGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCACTC 86180 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||||||| || || | ||| || ||||||||||| | ||||| ||||| ||| Sbjct 86181 AACGTGCGGCCGTCTTCCAATTGCTTGCCGGCAAAGATGAGGCGTTGCTGGTCCGGGGGA 86240 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| ||||||||| || ||| | ||||| | ||| || | ||| || Sbjct 86241 ATCCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTGTCGATCGAGTCGGATGGTTCCACA 86300 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| || || |||||||| ||||| ||||| || ||||| Sbjct 86301 TCCAACGTGATGGTTTTCCCCGTCAACGTCTTGACGAAGATTTGCAT 86347 >seq5958 Length=27980 Score = 159 bits (176), Expect = 7e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||| ||||||||||| || || | || || || |||||| Sbjct 18688 TCCTTTTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAG 18629 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| || |||||| ||||| || ||||||||||| |||||| || ||| | Sbjct 18628 ATCAAACGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCTTGAATCTTTTGCTTCACGTTG 18569 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || | ||| |||| ||| || ||||| ||||| ||||| |||||||| ||||| ||| Sbjct 18568 TCAATCGAGTCGGAAGGTTCCACGTCGAGCGTGATGGTCTTTCCCGTCAACGTCTTCACG 18509 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 18508 AAGATTTGCAT 18498 Score = 93.3 bits (102), Expect = 9e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 ||||||||||||| || || |||| || | ||| || ||||||||||||||||| Sbjct 18825 AACCACCACGCAGACGGAGCACCAAGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGC 18766 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 ||||||||||| || || | || || || |||||||||||||| || |||||| | Sbjct 18765 TGAGCGTGCGGCCGTCTTCCAACTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGG 18706 Query 282991 GAAT 282994 |||| Sbjct 18705 GAAT 18702 >seq3609 Length=34764 Score = 147 bits (162), Expect = 5e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||||||||| |||| ||| | || || || |||||||||||||| Sbjct 21584 CCACCACGCAGGCGAAGCACCAAATGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTC 21643 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || ||||| ||||| |||||||| | || |||||||| || Sbjct 21644 AGGGTACGACCGTCTTCCAGTTGCTTCCCCGCAAAGATAAGGCGCTGTTGGTCCGGGGGG 21703 Query 282993 ATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| |||||||| ||| || ||| | ||||| | |||||| | ||||| Sbjct 21704 ATGCCTTCCTTGTCCTGGATCTTCTGC-TTGACGTTGTCGATCGAGTCCGAGGGCTCGAC 21762 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || || | ||||| ||||| || ||||| Sbjct 21763 GTCGAGGGTTATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21810 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| ||||| | |||| ||| | || || || ||||||||||| || Sbjct 21355 ACCGCCACGGAGGCGCAACACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAATCGCT 21414 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || || || ||||| || || |||||||| | ||||| || ||| || Sbjct 21415 CAGGGTGCGACCGTCTTCCAGTTGCTTTCCCGCAAAGATGAGGCGTTGCTGATCAGGAGG 21474 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || |||||||| ||||||||| || ||| | ||||| | |||||| | ||||| Sbjct 21475 GATTCCTTCCTTGTCCTGGATCTTTTGCTTGACGTTGTCGATCGAGTCCGAGGGCTCGAC 21534 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || || | ||||| ||||| || ||||| Sbjct 21535 GTCGAGGGTTATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 21582 >seq3296 Length=14028 Score = 140 bits (154), Expect = 7e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 317020 TCCTTCGTCGGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTG 317079 ||||| | |||||||||||||||||| |||||| | ||||| | ||| || ||||||||| Sbjct 4285 TCCTTGGACGGGAACCCTTCCAACTGGCCGTTCGCGATCGCGCGCATGAGCGTCGACTTG 4226 Query 317080 CCAGCACCATTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTG 317139 || || || |||||||| || | || ||||| | |||||||| || | | ||| | | Sbjct 4225 CCGGCGCCGTTGGGGCCACACAACCCGTACCGGTGGCCCTTCTTGAGCTGCAGACGCGCG 4166 Query 317140 TTGTTCAGAAGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCG 317199 ||||| || || ||| | ||||| || || || |||||||| || || |||| ||| || Sbjct 4165 TTGTTGAGCAGGATCATGCCACCGTACGCGAGCGAGAACTCGCAGTCGCACAAGTCTTCA 4106 Query 317200 CC 317201 || Sbjct 4105 CC 4104 Score = 107 bits (118), Expect = 4e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 316161 TTCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAG 316220 ||| ||||| || || || ||||||||||||||||||| |||| ||||| ||| | Sbjct 5141 TTCCTTGTCCTCGCCAGACTGGAAACGCCATTGGATGTACTGGTTGGCCGTCAAGTCCAA 5082 Query 316221 ATGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATG 316280 || || |||||||| ||||| || ||||| |||||||| |||| ||||| ||||| Sbjct 5081 GTGCTCTTCGATGTGATGGAACGCATGCTGCGCCACGTACGCAAAGCGCATGGACGGATG 5022 Query 316281 CTTCCAAACGCTACCGTTAGTAGTTTCCA 316309 |||||| | | ||||| | || | |||| Sbjct 5021 CTTCCACATGGTACCGGTCGTCGGCTCCA 4993 >seq177 Length=11201 Score = 100 bits (110), Expect = 6e-16 Identities = 297/453 (66%), Gaps = 4/453 (1%) Strand=Plus/Plus Query 273597 GGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCAATACCGGAAGAACCATTCACC 273656 |||| || ||||| || | |||||||| || ||||| || ||| | || |||||| Sbjct 796 GGGTGGTGGCTCGGCACACTAGTAGACCACCCCGTGCCGATGCCGTCGGCGCCGTTCACC 855 Query 273657 AGAATACTCGGGATAATTGGGACATAATATTCGGGCTCAATTTTATCACCATCGTCGTAA 273716 | | | || | ||| || || |||| ||||||| | | || ||||||| Sbjct 856 AACAACATGGGCAGAATCGGTACGAAATACACGGGCTCTACGGGTACGCCGTCGTCGTGC 915 Query 273717 AGGTACTTCAACAAAGCATCATCCGTATCAACGAAAACCTTTCGCGTCTGAGGATTCAGT 273776 | ||||| ||| | | || |||| | || | | | ||| | || | || Sbjct 916 ACGTACTCCAAGAGCGTTTCGTCCGCCGCCGGAAAGATCAGCCTCGTGTACGGCTGGAGG 975 Query 273777 TTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAAC 273836 | ||| || || |||| ||||||||| |||||| || || || |||| || |||||| Sbjct 976 TGCGTAAAGATATACCGGGCACTCGCCGCGTCCTTCCCGCCCTGGAGCCGCGTGCCAAAC 1035 Query 273837 TGACCCTCGGGCAGTAGCCAGTTT-ATGTTGTTGCTACCGACGTAATCCTGAGCCATATT 273895 ||||| || | ||| ||| | ||||||| |||||| | ||||| ||||| || Sbjct 1036 TGACCAGACGGAACCAGC-AGTGGCACGTTGTTGGAGCCGACGAAGTCCTGCGCCATGTT 1094 Query 273896 CACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATA 273955 || || || | | || || |||||||||| || || || ||||||||||| || Sbjct 1095 GACAATCGTGCTCAATAGCGACGCCTCGCCGTGATGGTACGCCGTGTGTTCGGCGCAGTA 1154 Query 273956 ACCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGC-GGAATACA 274014 || | || || || |||| || | ||||| || | ||| || | | ||| Sbjct 1155 CCCGGCCAGTTGGGCGACTTTCATTTCCTTGACCAAGTGCCG-TCGAAAGCATGCAAACA 1213 Query 274015 ACACCTTCCGCTGCGAGGGCTTGAACCCATCAA 274047 | ||||| ||||| || ||||||| || |||| Sbjct 1214 ATACCTTGCGCTGGGACGGCTTGAGTCCGTCAA 1246 >seq4437 Length=14678 Score = 93.3 bits (102), Expect = 9e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 282914 TTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAA 282973 ||||||||||||||| || | ||| ||| |||| || || ||||| || ||||| ||||| Sbjct 6691 TTGGATGTTGTAGTCGGCCAACGTCCGGTCATCTTCGAGCTGTTTTCCAGCAAAAATCAA 6632 Query 282974 ACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 || || ||||| ||| ||||||||||||||||| Sbjct 6631 GCGCTGCTGGTCTGGCGGTATACCCTCCTTGTCTTG 6596 >seq946 Length=5074 Score = 93.3 bits (102), Expect = 9e-14 Identities = 126/175 (72%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 312485 GCGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATC 312544 ||| ||||||||||| | || || || ||| ||||| |||| || || || ||| || Sbjct 4189 GCGGCCCCACTTGACTGCATTCACGATCGACCGGAAGTTGTCGTCCATGAGAATGATGTC 4130 Query 312545 GGCTGCTTCCTTTGCAATGTCTGTACCAC---TCCCCATTGCACACCCGACGTCTGCTTC 312601 | || ||||| || | | || || | ||||||| ||| |||||||||| || | Sbjct 4129 CGACGCGTCCTTGGCCACCGCCGTGCCGCAGATCCCCATCGCAAACCCGACGTCCGCCTT 4070 Query 312602 CTTAAGAGCCGGGGCGTCGTTAGCACCATCGCCACTCGATGCGACGACGTGGCCA 312656 ||| | ||||||||||||||| | |||||||| || ||| || || || ||| Sbjct 4069 CTTCAAAGCCGGGGCGTCGTTCGTCCCATCGCCCGTCACTGCCACCACTTGACCA 4015 >seq124 Length=47272 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 312485 GCGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATC 312544 ||| ||||||||||| | || || || ||| ||||| |||| || || || ||| || Sbjct 43282 GCGGCCCCACTTGACTGCATTCACGATCGACCTGAAGTTGTCGTCCATGAGAATGATGTC 43341 Query 312545 GGCTGCTTCCTTTGCAATGTCTGTACCAC---TCCCCATTGCACACCCGACGTCTGCTTC 312601 | || ||||| || | | || || | ||||||| ||| |||||||||| || | Sbjct 43342 CGACGCGTCCTTGGCCACCGCCGTGCCGCAGATCCCCATCGCAAACCCGACGTCCGCCTT 43401 Query 312602 CTTAAGAGCCGGGGCGTCGTTAGCACCATCGCC 312634 ||| | ||||||||||||||| | |||||||| Sbjct 43402 CTTCAAAGCCGGGGCGTCGTTCGTCCCATCGCC 43434 >seq3869 Length=7315 Score = 86.0 bits (94), Expect = 1e-11 Identities = 111/153 (73%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 312485 GCGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATC 312544 ||| ||||||||||| | | || || ||| ||||| |||| || || || ||| || Sbjct 3899 GCGGCCCCACTTGACCGCACTCACGATCGACCGGAAGTTGTCGTCCATGAGAATGATGTC 3958 Query 312545 GGCTGCTTCCTTTGCAATGTCTGTACCAC---TCCCCATTGCACACCCGACGTCTGCTTC 312601 | || ||||| || | | || || | ||||||| ||| |||||||||| || | Sbjct 3959 CGACGCGTCCTTGGCCACCGCCGTGCCGCAGATCCCCATCGCAAACCCGACGTCCGCCTT 4018 Query 312602 CTTAAGAGCCGGGGCGTCGTTAGCACCATCGCC 312634 ||| | ||||||||||||||| | |||||||| Sbjct 4019 CTTCAAAGCCGGGGCGTCGTTCGTCCCATCGCC 4051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046655768016534