Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq27 104 2e-17 >seq27 Length=843962 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || |||||||| |||||||| || || |||||| | Sbjct 479755 ATGCAAATCTTCGTCAAGACGTTGACGGGTAAAACCATCACGTTGGATGTGGAACCATCC 479814 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | | | |||||||| || || || ||||| | ||| ||||| Sbjct 479815 GACTCGATCGACAACGTGAAGCAAAAGATCCAGGACAAGGAAGGCATCCCCCCTGATCAG 479874 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | || |||||||| ||||| |||||||||||| | || || ||| ||||| Sbjct 479875 CAACGCCTCATCTTTGCCGGCAAGCAATTGGAAGATGGCCGCACGTTGAGCGACTACAAC 479934 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTG 25244 || ||||||||||| || | ||| ||||| Sbjct 479935 ATCCAAAAGGAATCGACCTTGCACTTGGTG 479964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410794391832134