Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq76 87.8 3e-12 >seq76 Length=128956 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| || ||| | ||||| || || ||||| || || || | || | || | Sbjct 45104 ACCATGCAGATCTTTGTCAAGACCCTCACCGGCAAGACCATTACGCTCGACGTGGAGCCG 45045 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 || | ||| ||| | || ||||| ||||| || || ||||| || || || ||| Sbjct 45044 TCCGACTCGATTGACAATGTCAAGCAGAAGATTCAGGACAAGGAAGGGATTCCTCCGGAT 44985 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || ||| | || || ||||| || || || || |||||| | || || || || || Sbjct 44984 CAGCAACGACTCATCTTTGCCGGCAAGCAGTTGGAGGATGGCCGCACGTTGAGCGACTAC 44925 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||| || || || || || ||||||||||| | || | || |||||| Sbjct 44924 AATATCCAGAAGGAGTCGACCCTGCATTTGGTTCTTCGCCTCCGCGGTGGT 44874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755451457820800