Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq11 120 3e-22 >seq11 Length=1510989 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || || ||||| |||||||| ||||||| ||||| ||| ||| Sbjct 1070351 ACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTCAACGTGCGGCCATCTTCG 1070292 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| | |||||||| || || || ||||| ||||||||| Sbjct 1070291 AGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATGCCTTCCTTGTCTTGG 1070232 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || |||||||| || | |||| | ||||| ||| || || | || | || || Sbjct 1070231 ATCTTTTGTTTGACGTTGTCGATCGAGTCCGAAGGCTCCACGTCCAGCGTGATGGTCTTC 1070172 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||| || || ||||||||||| Sbjct 1070171 CCAGTCAAAGTCTTGACGAAAATCTGCAT 1070143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827856804852