Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 4e-13 >seq27 Length=843962 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| | || ||||| ||||| |||||||||||| || || | |||| Sbjct 479966 AGCACCAAGTGCAAGGTCGATTCCTTTTGGATGTTGTAGTCGCTCAACGTGCGGCCATCT 479907 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||||||| ||||| ||| |||| || | ||| ||||| ||| | ||||||||| || Sbjct 479906 TCCAATTGCTTGCCGGCAAAGATGAGGCGTTGCTGATCAGGGGGGATGCCTTCCTTGTCC 479847 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 || | |||||| || | | | | ||| || || || | |||||| || Sbjct 479846 TGGATCTTTTGCTTCACGTTGTCGATCGAGTCGGATGGTTCCACATCCAACGTGATGGTT 479787 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || ||||| || || || || |||||||| Sbjct 479786 TTACCCGTCAACGTCTTGACGAAGATTTGCAT 479755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341776214345