Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq26 93.3 4e-14 >seq26 Length=915853 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 20883 AGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTG 20942 |||| |||||||||||||| | | | |||||| || || || | |||||||| Sbjct 835423 AGCCTGGGAAACGGACGCGGCGATCGCTTCAGCTGCTCGAGGAGAGGCGCGACGTGGTTC 835482 Query 20943 TTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACG 21002 ||| || ||||| || || | | || | |||||| || | ||||| | || Sbjct 835483 GAGTACACATGGGCATCGCCAATGACATGGATAAAGTCGCCGGCTTGGAGGCCGCTCACT 835542 Query 21003 TGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCC 21062 || || | || ||||||||| |||||||| || ||||| || ||||| ||||| ||| Sbjct 835543 TGGGCTAGCATGCGCGTCAGGAGCGCGTAGCTCGCAATGTTGAATGGGACGCCGAGTCCC 835602 Query 21063 ATGTCGGCGGACCTCTGGTACAGCTG 21088 ||||| ||| | |||||||| ||| Sbjct 835603 ATGTCCGCGCTGCGCTGGTACATCTG 835628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427773492296880