Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq18 100 2e-16 >seq18 Length=1130244 Score = 100 bits (110), Expect = 2e-16 Identities = 121/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATT-TGCGGCCA 22798 |||| || | |||||||| ||||| |||||| || | || || ||||| || ||| ||| Sbjct 427223 ACGTATCGTTGCCTTTGCCGCTGTCGAAGGCATCTTCTTCTCGGGGTCGTTCTGCT-CCA 427165 Query 22799 TATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTA 22858 | |||||||| ||||| || || ||||| || ||| | || || ||||| | ||| Sbjct 427164 TCTTCTGGCTCAAGAAGCGAGGTCTAATGCCGGGTTTGTCCTTCTCGAACGAACTCATTT 427105 Query 22859 GCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGT 22900 || ||||||||||| ||||| |||||||| || || ||| Sbjct 427104 CTCGCGACGAAGGTCTGCACTGCGACTTTGCGTGCTTGATGT 427063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356231511691843