Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq11 91.5 1e-13 >seq11 Length=1510989 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | || || || || || ||||| || | || || | || || ||| | Sbjct 1070140 AATATGCAGATTTTCGTCAAGACTTTGACTGGGAAGACCATCACGCTGGACGTGGAGCCT 1070199 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||| | ||||| | |||||||||||||| ||||| |||||||| || || || Sbjct 1070200 TCGGACTCGATCGACAACGTCAAACAAAAGATCCAAGACAAGGAAGGCATCCCGCCTGAC 1070259 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| | |||| | | |||||||| |||||||||| | | | | ||||| || Sbjct 1070260 CAGCAGCGCTTGATCTTTGCGGGCAAGCAGCTCGAAGATGGCCGCACGTTGAGCGACTAC 1070319 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| ||||| ||||| || Sbjct 1070320 AACATCCAAAAGGAATCGAC 1070339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933479634555