Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq27 158 2e-33 seq18 156 8e-33 seq76 140 6e-28 seq97 134 3e-26 seq11 134 3e-26 seq4 129 1e-24 seq9 105 1e-17 seq26 102 2e-16 seq19 86.0 1e-11 >seq27 Length=843962 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| | || || || ||||||||||| || ||| Sbjct 479981 CCACCACGCAGGCGGAGCACCAAGTGCAAGGTCGATTCCTTTTGGATGTTGTAGTCGCTC 479922 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| || ||||| ||||| || ||||| | ||| || || || || Sbjct 479921 AACGTGCGGCCATCTTCCAATTGCTTGCCGGCAAAGATGAGGCGTTGCTGATCAGGGGGG 479862 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || |||||| ||| ||| ||||| | ||| | || ||| || Sbjct 479861 ATGCCTTCCTTGTCCTGGATCTTTTGCTTCACGTTGTCGATCGAGTCGGATGGTTCCACA 479802 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||||||||| ||||| | ||||||||||| || ||||| Sbjct 479801 TCCAACGTGATGGTTTTACCCGTCAACGTCTTGACGAAGATTTGCAT 479755 >seq18 Length=1130244 Score = 156 bits (172), Expect = 8e-33 Identities = 279/397 (70%), Gaps = 14/397 (4%) Strand=Plus/Plus Query 9971 CTCGAAGAAGTTGGACTTGCCCTCGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTC 10030 |||||| ||||||| |||||||| ||| || || | ||||| |||| || ||||||| Sbjct 426803 CTCGAAAAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATCCAGTCGAACGGGTTCTT 426862 Query 10031 GGCGCCAAACTGCTTGGGGTAACCGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGAT 10090 ||| | || |||||||| ||||| ||| || | ||| || || |||||| || Sbjct 426863 GGCCGCGTACAGCTTGGGGGCGCCGAGGGCTTCGAGGAGGCGATCCGCGCAGAACTCAAT 426922 Query 10091 GTACTGGCTCATCAGGTCCGAGTTCATGCCAATCATGCGGCAGGGGATGGC-GTCGCAAA 10149 ||||| || ||| ||| ||||||||||||||| | || || ||| ||| || | | Sbjct 426923 GTACTCGCACATGAGGGACGAGTTCATGCCAATGA-GCTCCACGGGCAGGCTCTCACTGA 426981 Query 10150 TGAAGTCCTTTTCGTTGGCGACCGCTTCCTCGACGATGCTCTT---TAC-CACGTCAAGG 10205 || | ||| || | ||||| || || ||||||| ||| | | | | ||| | Sbjct 426982 CAAACTGCTTCTCAATCGCGACGGCGTCGCCGACGAT-CTCGTGGATGCGCTGGTC---G 427037 Query 10206 GACAGCTTGTTCTCGAGCTTCGAATACA-GGAGCTCTCCAAACTGCTGGTGGAGGCCCTC 10264 |||| |||||| |||||||||| |||| ||| | |||| | ||| || || || Sbjct 427038 GACAACTTGTTGACGAGCTTCGAGTACATCAAGCAC-GCAAAGTCGCAGTGCAGACCTTC 427096 Query 10265 GTCGCGGCTGATGAACTCGTTGGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAG 10324 |||||| |||| ||||| || || || ||| ||||| || || || || || Sbjct 427097 GTCGCGAGAAATGAGTTCGTTCGAGAAGGACAAACCCGGCATTAGACCTCGCTTCTTGAG 427156 Query 10325 CCAGAAAATGGCGCAGAACGACCCGGAGAACAGAAGA 10361 |||||| |||| |||||||||||| |||| |||||| Sbjct 427157 CCAGAAGATGGAGCAGAACGACCCCGAGA--AGAAGA 427191 >seq76 Length=128956 Score = 140 bits (154), Expect = 6e-28 Identities = 172/235 (73%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | ||||| || || || ||||| || ||||| || || ||| Sbjct 44875 CCACCGCGGAGGCGAAGAACCAAATGCAGGGTCGACTCCTTCTGGATATTGTAGTCGCTC 44934 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || |||||||| ||||| || ||||||| ||| || || || ||| Sbjct 44935 AACGTGCGGCCATCCTCCAACTGCTTGCCGGCAAAGATGAGTCGTTGCTGATCCGGAGGA 44994 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| |||||||| |||||| || || | ||| | | || || Sbjct 44995 ATCCCTTCCTTGTCCTGAATCTTCTGCTTGACATTGTCAATCGAGTCGGACGGCTCCACG 45054 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT 68469 || | || ||||| || || |||||||||||||| || |||||||| ||| || Sbjct 45055 TCGAGCGTAATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATGGTGCGAT 45109 >seq97 Length=16286 Score = 134 bits (148), Expect = 3e-26 Identities = 441/673 (66%), Gaps = 27/673 (4%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||| | |||| ||||| ||| | ||||| || ||||| || Sbjct 5306 CGCCACTGGATGTACTGGTTCGCCGTCAAGTCCAAGTGCTCTTCAATGTGATGGAACGCG 5365 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || |||||||| | ||||| || |||||||||| | || ||||| Sbjct 5366 TGCTGCGCCACGTACGCAAAACGCATCGACGGGTGCTTCCACAACGTCCCTGTCGTCGGC 5425 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | | ||||| || | | |||||| | || | |||||| || || ||||| || ||| Sbjct 5426 TCGACTTCGCCCGTCAACATCTTGATCATGGTCGACTTGCCGGCGCCGTTGGGCCCGATC 5485 Query 225161 ACGCCAATCCGGGATGACATTGCA-ACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGCC 225219 ||| |||| || || |||| ||| || | | | | |||| | |||| | | Sbjct 5486 ACGGCAATGCGCGACGACAACGCACACGTAATCG-TAATGTTGTT---GATC-----GAC 5536 Query 225220 AGTTTGGTAAGC-AAAGGCCAC-GCCAC--GCAG--CTTC------ATGATGGCACGGTC 225267 | |||| | || ||| || | || |||| ||| ||||||| | | Sbjct 5537 GGCTTGG-ACGCGCCAGGGTACTGGTACGAGCAGTTGTTCATGCGGATGATGGGCTTGCC 5595 Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327 |||| | || | | |||||||| |||||||| |||| || | |||| | Sbjct 5596 CTTGTTCTTGATGTCGGCAAGGAACCCCGGCTCGGGAAACTTGAACGCAAACGTCGCGGC 5655 Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCC 225387 | || || |||||| | || || || ||| | || || ||||| ||| || Sbjct 5656 TTCCAAGTTGTAGTACGCCTTGGCTTCCGGGCGCAGCTCGACAAAGTGAGACATGTTGCC 5715 Query 225388 GAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTC 225447 | | | || |||||||| ||||||| ||||| || | || | |||||| ||| Sbjct 5716 CACATACGTCTTGAGCTTGCGGTTCTTTTCGTAGTGGATGATGTTGGTGCACACGTTGTC 5775 Query 225448 AAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGC--CCTTGAGG 225505 ||||| ||||||||||| || || | || |||| |||| ||| | ||| | ||| Sbjct 5776 GAGGAATCCAGAGTCGTGCGATACCACAATCGACGTCACG-TCG-CCGGCATGGGTCAGG 5833 Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565 | | | ||| || |||||| ||||||| |||||| || ||||| |||| | | Sbjct 5834 TAGTTTTCCAACCACGCAACGTTGGCCACGTCCAAGTGGTTGGTCGGTTCATCCAACAAC 5893 Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625 | ||||| || | || | |||||||| | | |||||||| ||||| || || Sbjct 5894 AAAATGTCGGCCTTCATCAACATGGCGCGGGCCAATTCGAGCTTCATCTTCCACCCACCC 5953 Query 225626 GACAGGGAGCCGA 225638 |||| || |||| Sbjct 5954 GACAACGACCCGA 5966 Score = 125 bits (138), Expect = 1e-23 Identities = 439/673 (65%), Gaps = 27/673 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||| | |||| ||||| ||| | ||||| || ||||| || Sbjct 12496 CGCCACTGGATGTACTGGTTCGCCGTCAAGTCCAAGTGCTCTTCAATGTGATGGAACGCG 12437 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || |||||||| | ||||| || |||||||||| | || ||||| Sbjct 12436 TGCTGCGCCACGTACGCAAAACGCATCGACGGGTGCTTCCACAACGTCCCTGTCGTCGGC 12377 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | | ||||| || | | |||||| | || | |||||| || || ||||| || ||| Sbjct 12376 TCGACTTCGCCCGTCAACATCTTGATCATGGTCGACTTGCCGGCGCCGTTGGGCCCGATC 12317 Query 225161 ACGCCAATCCGGGATGACATTGCA-ACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGCC 225219 ||| |||| || || |||| ||| || | | | | |||| | |||| | | Sbjct 12316 ACGGCAATGCGCGACGACAACGCACACGTAATCG-TAATGTTGTT---GATC-----GAC 12266 Query 225220 AGTTTGGTAAGC-AAAGGCCAC-GCCAC--GCAG--CTTC------ATGATGGCACGGTC 225267 | |||| | || ||| || | || |||| ||| ||||||| | Sbjct 12265 GGCTTGG-ACGCGCCAGGGTACTGGTACGAGCAGTTGTTCATGCGGATGATGGGCTTCCC 12207 Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327 |||| | || | | ||||| || |||||||| |||| || | |||| | Sbjct 12206 CTTGTTCTTGATGTCGGCAAGGAAACCCGGCTCGGGAAACTTGAACGCAAACGTCGCGGC 12147 Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCC 225387 | || || |||||| | || || || ||| | || || ||||| ||| || Sbjct 12146 TTCCAAGTTGTAGTACGCCTTGGCTTCCGGGCGCAGCTCGACAAAGTGAGACATGTTGCC 12087 Query 225388 GAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTC 225447 | | | || |||||||| ||||||| ||||| || | || | |||||| ||| Sbjct 12086 CACATACGTCTTGAGCTTGCGGTTCTTTTCGTAGTGGATGATGTTGGTGCACACGTTGTC 12027 Query 225448 AAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGC--CCTTGAGG 225505 ||||| ||||||||||| || || | || |||| |||| ||| | ||| | ||| Sbjct 12026 GAGGAATCCAGAGTCGTGCGATACCACAATCGACGTCACG-TCG-CCGGCATGGGTCAGG 11969 Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565 | | | ||| || |||||| ||||||| |||||| || ||||| |||| | | Sbjct 11968 TAGTTTTCCAACCACGCAACGTTGGCCACGTCCAAGTGGTTGGTCGGTTCATCCAACAAC 11909 Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625 | ||||| || | || | |||||||| | | |||||||| ||||| || || Sbjct 11908 AAAATGTCGGCCTTCATCAACATGGCGCGGGCCAATTCGAGCTTCATCTTCCACCCACCC 11849 Query 225626 GACAGGGAGCCGA 225638 |||| || |||| Sbjct 11848 GACAACGACCCGA 11836 Score = 84.2 bits (92), Expect = 4e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 224448 TGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAA 224507 ||||||| || | || || |||||||| || || | ||| | | | ||| || | Sbjct 4761 TGTGAGAGATCATGACGACGCCGCCGCCAAACTCCTTGATGGCCGTCGCCAACGCACCCA 4820 Query 224508 GCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCC 224567 ||| ||||| || | |||| ||||| || |||| | | | ||| ||| ||| Sbjct 4821 ACGAGTCGCGATCCAAATAGTTGGTCGGTTCGTCCAACACCAAGATGTGCGGGTTGAGCC 4880 Query 224568 ACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCG 224627 ||| ||| ||| | | || | ||| ||||| || ||||||||||| ||||| || |||| Sbjct 4881 ACATGGCCGCAGCCAAGACGACCTTGACCTTTTGCCCGCCAGAGAGACCGCGCATGCGCG 4940 Query 224628 AGTGAGTCGTGAATTCGGGGTCAAGACCAATCTTGGCCA 224666 |||| || |||||| | | | || |||| ||| ||| Sbjct 4941 AGTGCGTGCCGAATTCAGCGCCCAGCCCAAAGTTGTCCA 4979 >seq11 Length=1510989 Score = 134 bits (148), Expect = 3e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| | ||| || || ||||||||||| || ||| Sbjct 1070369 CCCCCACGCAGGCGGAGAACCAAGTGCAACGTCGATTCCTTTTGGATGTTGTAGTCGCTC 1070310 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | |||||| || || || || | | || ||||| || || Sbjct 1070309 AACGTGCGGCCATCTTCGAGCTGCTTGCCCGCAAAGATCAAGCGCTGCTGGTCAGGCGGG 1070250 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| |||||| |||||| ||||| | ||| | | || || Sbjct 1070249 ATGCCTTCCTTGTCTTGGATCTTTTGTTTGACGTTGTCGATCGAGTCCGAAGGCTCCACG 1070190 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| || || || | ||||||||||| |||||||| Sbjct 1070189 TCCAGCGTGATGGTCTTCCCAGTCAAAGTCTTGACGAAAATCTGCAT 1070143 >seq4 Length=2763071 Score = 129 bits (142), Expect = 1e-24 Identities = 440/673 (65%), Gaps = 27/673 (4%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||||||| | |||| ||||| ||| | ||||| || ||||| || Sbjct 1861989 CGCCACTGGATGTACTGGTTCGCCGTCAAGTCCAAGTGCTCTTCAATGTGATGGAACGCG 1861930 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| || |||||||| | ||||| || |||||||||| | || ||||| Sbjct 1861929 TGCTGCGCCACGTACGCAAAACGCATCGACGGGTGCTTCCACAACGTCCCTGTCGTCGGC 1861870 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 | | ||||| || | | |||||| | || | |||||| || || ||||| || ||| Sbjct 1861869 TCGACTTCGCCCGTCAACATCTTGATCATGGTCGACTTGCCGGCGCCGTTGGGCCCGATC 1861810 Query 225161 ACGCCAATCCGGGATGACATTGCA-ACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGCC 225219 ||| |||| || || |||| ||| || | | | | |||| | |||| | | Sbjct 1861809 ACGGCAATGCGCGACGACAACGCACACGTAATCG-TAATGTTGTT---GATC-----GAC 1861759 Query 225220 AGTTTGGTAAGC-AAAGGCCAC-GCCAC--GCAG--CTTC------ATGATGGCACGGTC 225267 | |||| | || ||| || | || |||| ||| ||||||| | Sbjct 1861758 GGCTTGG-ACGCGCCAGGGTACTGGTACGAGCAGTTGTTCATGCGGATGATGGGCTTCCC 1861700 Query 225268 CTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTC 225327 |||| | || | | |||||||| |||||||| |||| || | |||| | Sbjct 1861699 CTTGTTCTTGATGTCGGCAAGGAACCCCGGCTCGGGAAACTTGAACGCAAACGTCGCGGC 1861640 Query 225328 CTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCC 225387 | || || |||||| | || || || ||| | || || ||||| ||| || Sbjct 1861639 TTCCAAGTTGTAGTACGCCTTGGCTTCCGGGCGCAGCTCGACAAAGTGAGACATGTTGCC 1861580 Query 225388 GAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGCGTC 225447 | | | || |||||||| ||||||| ||||| || | || | |||||| ||| Sbjct 1861579 CACATACGTCTTGAGCTTGCGGTTCTTTTCGTAGTGGATGATGTTGGTGCACACGTTGTC 1861520 Query 225448 AAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGC--CCTTGAGG 225505 ||||| ||||||||||| || || | || |||| |||| ||| | ||| | ||| Sbjct 1861519 GAGGAATCCAGAGTCGTGCGATACCACAATCGACGTCACG-TCG-CCGGCATGGGTCAGG 1861462 Query 225506 TGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGC 225565 | | | ||| || |||||| ||||||| |||||| || ||||| |||| | | Sbjct 1861461 TAGTTTTCCAACCACGCAACGTTGGCCACGTCCAAGTGGTTGGTCGGTTCATCCAACAAC 1861402 Query 225566 AGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCG 225625 | ||||| || | || | |||||||| | | |||||||| ||||| || || Sbjct 1861401 AAAATGTCGGCCTTCATCAACATGGCGCGGGCCAATTCGAGCTTCATCTTCCACCCACCC 1861342 Query 225626 GACAGGGAGCCGA 225638 |||| || |||| Sbjct 1861341 GACAACGACCCGA 1861329 Score = 84.2 bits (92), Expect = 4e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 224448 TGTGAGAAATAACTACTACACCGCCGCCGAATGACTCAAGGGCGGATGAAAGCGCGCCAA 224507 ||||||| || | || || |||||||| || || | ||| | | | ||| || | Sbjct 1862534 TGTGAGAGATCATGACGACGCCGCCGCCAAACTCCTTGATGGCCGTCGCCAACGCACCCA 1862475 Query 224508 GCGACTCGCGGTCAAGGAAGTTCGTCGGCTCATCCAGGATGATAACGTGGGGGCACTGCC 224567 ||| ||||| || | |||| ||||| || |||| | | | ||| ||| ||| Sbjct 1862474 ACGAGTCGCGATCCAAATAGTTGGTCGGTTCGTCCAACACCAAGATGTGCGGGTTGAGCC 1862415 Query 224568 ACAGGGCTGCACCAACCACCAGCTTCACCTTCTGACCGCCAGAGAGGCCGCGGATCCGCG 224627 ||| ||| ||| | | || | ||| ||||| || ||||||||||| ||||| || |||| Sbjct 1862414 ACATGGCCGCAGCCAAGACGACCTTGACCTTTTGCCCGCCAGAGAGACCGCGCATGCGCG 1862355 Query 224628 AGTGAGTCGTGAATTCGGGGTCAAGACCAATCTTGGCCA 224666 |||| || |||||| | | | || |||| ||| ||| Sbjct 1862354 AGTGCGTGCCGAATTCAGCGCCCAGCCCAAAGTTGTCCA 1862316 >seq9 Length=1715687 Score = 105 bits (116), Expect = 1e-17 Identities = 141/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGA-ACATGCCATATGCCTCACGGTA 268461 || |||||||||||||| | |||||||| ||| | | ||||| | || || |||||||| Sbjct 1424842 GGACTCTCGTGGTTGAACAAAATGCCGTT-CACACAATACATGTCGTACGCTTCACGGTA 1424784 Query 268462 GTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAA 268521 || || ||| ||||| | || || ||| || || | ||||| || || || ||||| Sbjct 1424783 ATTGACCACCATCCAGAACGCGTACTGCTTGGCGACGCCATACGGTGATCGCGGGTGGAA 1424724 Query 268522 GGGCGTCGTGATCTTT-TGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATG 268580 ||||| || || || || || | || ||||||||||||||||| || || || | Sbjct 1424723 TGGCGT-GTCTTCGTTCTGCGGCACGGTCCGCACTTTGCCAAAGAGCTCAGACGTGGACG 1424665 Query 268581 CTTGGTAGAAC 268591 ||||||| ||| Sbjct 1424664 CTTGGTAAAAC 1424654 >seq26 Length=915853 Score = 102 bits (112), Expect = 2e-16 Identities = 281/425 (66%), Gaps = 12/425 (3%) Strand=Plus/Minus Query 176109 CCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTTCAATCCGGTCGCC- 176167 |||||||| || | || |||| | |||||||||||| ||||||| | ||| |||| Sbjct 570705 CCATTCACGAGCAACAAGGGGAGGATGGGAACATAGTGCACCGGTTCGA--CGGGCGCCC 570648 Query 176168 -GTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAATATC--CCGGGT 176224 ||| || | || ||||| ||| || ||||||||||| | || ||| ||| || || Sbjct 570647 CGTCGTCGTAGACGTAGTCCAGGAGCGGCTCGTCGGCC--GCGGGAAAGATCAGTCGCGT 570590 Query 176225 GTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGAC--GCACTGTCCTTGCCTCCGTGA 176282 | || || | || |||||||||| || ||| || ||||||||| || || Sbjct 570589 ATACGGCTGCAAATACGTAAAGATATACC--GCGGACTTGCGGCGTCCTTGCCGCCTTGG 570532 Query 176283 AGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAG 176342 || || | || || |||||| || | || | || ||| || || || || || Sbjct 570531 AGCCGCGTCCCAAACTGTCCGGACGGGACGAGGAGCGGGACGTTGTTGGACCCGACAAAG 570472 Query 176343 TCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGCCGGCG 176402 || || ||||| ||| || | | |||| || || || ||||||||||| | | | Sbjct 570471 TCCTGCGCCATGTTGACGATCGTGGATAGGAGGGAGGCTTCCCCGTGGTGATACGCCGTG 570412 Query 176403 TTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGTTGCGCTTC 176462 | ||| ||| || || | ||| |||||||| |||||| || |||| || Sbjct 570411 TGCTCGGCGCAGTAACCCGCGAGCTGGGCGACTTTCATTTCTGCAACCAGGTGCCGGCGA 570352 Query 176463 AACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACGGAATG 176522 || || || || | || |||||||| ||||| || || || | || ||| ||| Sbjct 570351 AAGCACGCAAAGAGCACTTTGCGCTGCGACGGCTTGAGGCCGTCAATCACGCTCGGGATG 570292 Query 176523 GAACG 176527 || || Sbjct 570291 GACCG 570287 >seq19 Length=1079871 Score = 86.0 bits (94), Expect = 1e-11 Identities = 142/203 (70%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 224976 CATACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGA 225035 ||||||||||||| ||||||| | ||| | |||||| ||| | ||| | ||||||| Sbjct 111261 CATACCGCCACTGAATGTACTCGACGGGAGAGCTGTCCAAGTGCTGCTCGACGTGGTGGA 111320 Query 225036 AAGCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAG 225095 | ||||| || |||||||| | ||||| |||| | |||||||||| || | || Sbjct 111321 GCGAGTGCTGCGCAACGTACGCGACGCGCAAGTTGTGGTGCTTCCACATCTCACCGC-AG 111379 Query 225096 TCGGTTG----TGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTG 225151 |||| | | ||| | | || | |||||||||||| | || || || || ||| Sbjct 111380 TCGGGGGACGTTTCCTGGACA---AGCATCTTGATGAGCGTCGATTTCCCGGCGCCGTTG 111436 Query 225152 GGGCCAATCACGCCAATCCGGGA 225174 ||| |||||| | | ||||| Sbjct 111437 CCGCCGATCACGGCGACGCGGGA 111459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921616858745320