Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq65 82.4 6e-11 >seq65 Length=287223 Score = 82.4 bits (90), Expect = 6e-11 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391 |||||||| ||||||||||||| ||| |||||||||||| | ||| ||| | || Sbjct 67963 CATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAATTAGGTACTATCGAGTAGACT 68022 Query 114392 AAAACTGATATATTGAGCCATTCG 114415 |||||||||||||||||||||||| Sbjct 68023 AAAACTGATATATTGAGCCATTCG 68046 Score = 82.4 bits (90), Expect = 6e-11 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCACG-TTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588 |||||||| ||||||||||||| ||| |||||||||||| | ||| ||| | || Sbjct 67963 CATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAATTAGGTACTATCGAGTAGACT 68022 Query 115589 AAAACTGATATATTGAGCCATTCG 115612 |||||||||||||||||||||||| Sbjct 68023 AAAACTGATATATTGAGCCATTCG 68046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060072345762