Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_011055.1 Length=76312 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 1e-11 >seq14 Length=1185136 Score = 84.2 bits (92), Expect = 1e-11 Identities = 118/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Plus Query 65314 CAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAG 65373 || || ||| | ||||||||||| || ||||||| ||| || || || || | Sbjct 556158 CAACCAGACTCAGGCGAGCAGGCTCTTGAGATCGCCGACACACTGATCCGATCGGGGGCA 556217 Query 65374 CTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGC 65433 || | || || || |||||||| ||||| || ||||||||||| |||||||| ||| Sbjct 556218 GTGGATGTGGTTGTGGTCGACTCTGTCGCGGCGCTCGTGCCGCGCGCTGAGCTCGAGGGC 556277 Query 65434 GACATCGGGGA-CAGTCACGTCGGCCTGCACGCGCGCCTCATG 65475 || || ||||| ||| || | | ||||| |||||||| ||| Sbjct 556278 GAGATGGGGGATCAG-CAGATTGCGCTGCAGGCGCGCCTGATG 556319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244072169194793