Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aphanomyces_20invadans_20[genbank_20GCA_5F000520115.1_202014-01-15] 481 sequences; 71,402,472 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq4 96.9 1e-14 >seq4 Length=2763071 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 || || ||||| || || || |||||||||||||| || ||||| | | || ||| Sbjct 304713 AAGGGCGAAACCAAGACGTTCCAACCTGAAGAAATTTCGTCGATGGTGTTGATCAAGATG 304772 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339 || ||| | ||| || ||||| || | || | | || || || || || || Sbjct 304773 AAGGAAGTGTCGGAAGCCTACATTGGGTCGACCGTCAACAACGCTGTCATCACCGTCCCT 304832 Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 || |||||||| ||| | ||||| ||||| || || || || || |||||||| || Sbjct 304833 GCCTATTTCAACGATTCGCAACGTCAAGCGACCAAGGACGCCGGTGCCATTGCTGGGTTG 304892 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 ||||| ||||| || || || ||||| || || ||||| Sbjct 304893 AATGTGCTTCGTATCATCAACGAACCCACTGCCGCTGC 304930 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 451220 AAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATG 451279 || || ||||| || || || |||||||||||||| || ||||| | | || ||| Sbjct 356647 AAGGGCGAAACCAAGACGTTCCAACCTGAAGAAATTTCGTCGATGGTGTTGATCAAGATG 356588 Query 451280 AAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCC 451339 || ||| | ||| || ||||| || | || | | || || || || || || Sbjct 356587 AAGGAAGTGTCGGAAGCCTACATTGGGTCGACCGTCAACAACGCTGTCATCACCGTCCCT 356528 Query 451340 GCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTA 451399 || |||||||| ||| | ||||| ||||| || || || || || |||||||| || Sbjct 356527 GCCTATTTCAACGATTCGCAACGTCAAGCGACCAAGGACGCCGGTGCCATTGCTGGGTTG 356468 Query 451400 AATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 ||||| ||||| || || || ||||| || || ||||| Sbjct 356467 AATGTGCTTCGTATCATCAACGAACCCACTGCCGCTGC 356430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975706224017948